| Id Trinity | TRINITY_DN46601_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_433784 |
| Sequence | ATTGATCAAAATCATTTACTCATAATTCACATTGGTAATATTTCAAATTTAAGAAGAAGTAGAAGTACTTCATCACCTACCTAGAATTGAACGGAACCAC CACAAATCGCAACCCTTTGTTCCATTACAAAAATGTTGAAGCCATCATTTCATTATCTGAACTCGTTACCTTCTTCTCATTCCTCTACTTCTAATTTAAT CTCGATCAGGTTTCGTCGCACCGCCAAAATTTCAATGTCGATGTCAACGTCTCACGACACCGTTCCTCCTGAAAACCGCGTTGTTGTTGGATTTGGAATG ACGACGGTAGATTTCTTAGCTACCGTTGATGGATTTCCGAACCCGGACGACAAGGTCCGAACAACGTCGTTCAAGGTTCAAGGAGGTGGAAATGCCGGTA ATGCTATAACATGTGCTGCTCGGCTTGGCTTGAAACCCAAGCTCATCTCCAAGGTTGCAGATGATTCTCAAGGCACAGACATTTTGAACGAGCTGCAAGC TGATGGTGTTGATACTTCATTTATTGTGGTATCCAAGGGTGGTAGTTCAACATTTTCATATGTACTAATCGACAACCAAACGTAAGGCATTTACCATTAT GTTTTGACCATTATTTCCCACCCTGACAAATGAGTGCTTTTCTTTAACAACATGACTACTAATTCAAGGCTTAAAATAGCATGATCATATTAAGAAAAAC TTTACAGAACACAGTTTGATGATTGTATGCTTGAGCTCTAGGGTATTTCAGATTCATCAATGCCTCATATTTTTATTCGTTATATTCTAAATATGGAATT ATGCATAAAGGTGCATTGTTTTTTGTTACTTTTTTGAAATACTCATGCGAGTTCACTTTGAAAATTTTTCAACACCTTTCCATATATAATGTATTTCAAT TATTTAATCACATAACAACCTGGGATTATGTTTTATCGACAACACATCTGCATCAATACTTCCAGAAAAACTCGTACAAGTATTTACACCCCAGGAGAAC CTCCCATGGTGCCAGATGACTTGTCCCAGTCAACCTTATTATCTGCATTTGATGAAGCAAGATTAGTTTATTTTGATGGAATGTCTACTGAAACTGCTCT ATTTGTTGCACAGGAGGCAGCTCGCAACAATATTCCTATTTTAGTAGAGGCAGAATCACCAAGGGAAGGATTGGATGAACTCCTGAAGTTGGCTGATTAT GCTGTATGCTCTGCAAGGTTTCCACAGGCTTGGACACAGGAACCATCTATTCCAAGTGCATTGGTTTCTATGCTTTTAAGATTGCCAAATATCAAATTTG TGATTGTGACTTTGGGTGAAGATGGATGTCTAATGTTGGAAAGAAGTGCAGACGGTGAATACGCCACTGGCCTTTTCAATCTTACTTTATTTAGATTTCT TGAAGGGTAGCATAGTGCTGTATCATCATTGTTATGAGTTTCTTTTTTCTCCTTTTCAAGCAAGTATTTAGCTTAACATACAAGTTTAATGCTCTTTTTA GCAGAGGATGCTGACAGAGAAGAAAGGGATGCAGAGAGTTTTTTAGAATTCTTATATAAAGGAAAAGATGATAGCTTGACCATCCCAACCTGCATATCAT CAGTAAAATATTGTTGAACCTATAACTTCTTCAATTTATATTTTATTTTGACATATATTGTTGAAAGTAGAATGCCAGGACTGAATATAGAATCATACTT CTTTAGATCTTGGAGGGTCATAGTTGATATAAAAGAACCTTGTCCTAAAAGATACACGCAATGCAAAAACATGAATGCAAGAAAAACCATGTTCGGATAT ATGGATGGAATCGGAATATCGGATATATGGATCGACTCATTTTTTTGGAAGAAATCACTTCACTTTTTGCTTGAGATATGTTACAAATGCTTTATACAAC AGCAATCACTTTTTATCCCTTTGAATGGAATCGGAATATCGGATATATGGATCGACTAATTGGTGCCAAGAATTTTGTTAATAATATTAAACCAGGTAAA ACACTTTTTCTCCTTTTATATTTGCTTAATGATTTTCACAGGTGGTGACAAAATTGAAAGGAAAGGGAATAGGGACACTGTGTGGGAGATTCTTTATTGG AACAGCAGAGAAAATACCTGATTCTGAACTAGTTGATACAACTGGTGCAGGGGATGCATTTATTGGAGCCATTATTTATGGTAGGAGTATTACTGGCCTA GGCTGATTTTTTTATCCTTTGTCTAAGCATCTTAATTGAGACATAAATCAGATTATTTGGGGTTTTTCATGGTTTGAAATTGATACTCTCCTAATAACTA ATCAGTGTAAGCTCAGAGTACCAGGTGGACAGAAAAAAGAGCTCATATATGGTCCTCTGAGATTAAGATAGTAGTAAAGCTGCCAAGAGTGACACAACTT CCTCTTTGTGTTTACATTAGTTAAAAGGTTCAGGATACTGAATTATGCTCTCTGACTTTTTTTGTAGCTATCTGTGCAAACATGGCACCAGAGAAAATGT TACCATTCGCTGCTCAAGTGGCAGCTGCCAAGTGTAGAGCTTTGGGAGCTCGAACTGGTCTTCCATATCATACAGATCCACGCTTGGCATCCTTTTTACA CTAGAGGTAACTAATTGTATGCTGCATTCCGCAAGCATGGATCGCTCCAAAAATGAATCTTTTGATTCAGTATTCCCATCTAGCAAGCTTAACTCTCCTC CATCTCTGTTTACAGAGTGACTGTGCTTACTTTGTGGTTACTTGTAGATGTTTTGTTGTAAGATGTATCCTATGGTTTGTAAAGAATCATGAGTTCAACA AGTATAGAGTTTCTTCGCTAACTATGGCCTGGCCATCACCCTTTCCCTGACGTTGTCTTGATCATCCTCGGTAGGGTTGCGGGGTGCTGTTAAACCAGTG TGTTATTGGGGTGTCTTCCCCATTTCTAATTGCTTGGTGTCAATATAATTTTACATTTCCGGACATCTCACTTGGGAATGTGGTTTACTATGTTTAGTAG AATGTTATAAAAATATTTACCCAGATAAATAGGAATGAATCATTTGCAATGGGTGTAGGAAATTTGAACTTTGACCTTTTAGATGGGAATATTTTTACAC TCCAAGAACATGCTTTAAATCATGTTGGATGCCAAAAGCTACCTTAGAGGGTCCTGTTTCTCAGTGTAGGAAATGCTTCCATTGTGTAAGTTGTGATTAT TGGTTCAACTAAATTCAAAGGCCCTCAAGGGTACAATATTGGTAGCCGGATTTGAATGAAGTCCAAACTAAATTTAATAGTTTGGCTTAAAATTTGATGA TTCTATTTTCCACTTGAGTGTCATTCAAGTCATTCCAATAGAATATTGAGTTTCCTTCAGTATGAGGGAACCTTTTATGTAATTTAACTTACATAAAAGA GGTGTGAGTGCCTTGAAAGCAGAAATCATCAAATTTGATTAAATTCCATGGATACATAAATACCCAATGGAAGAAAGAGGTGACTCATTCTCGCACTCTT TTCTTTGGTGATGACTGTCTCATGGACCCAAAAGCCAAGCATGGCTCGGTTGAATACATCAACTTGGATGGAAAGAATGTTGGTGCAACCATGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_145803; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433784
| Blastp | - |
|---|---|
| Blastx | Ribokinase from Bacillus with 38.55% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444453.1) |
| Pfam | pfkB family carbohydrate kinase (PF00294.23) |
| Rfam | - |
| GO | - |