Ll_transcript_433980

• Id Trinity: TRINITY_DN46605_c1_g2_i3
• Name Transcript: Ll_transcript_433980
• Sequence: GAAATGTTCAATAGATTATGGTAATCTTCTCTTTTATTTCATAACTTTGTTTCAGATTTCATTTTTATTGTAATATTTTCATTTTCTCCTTGATTCGGTT CAGAAATAAATAGATAAAGCTTAGTATGTAGTTTGATATCCTTTGTGAATTAGGAAGTAGCATATAGGTAATAGGATTGTAGCACTATTGGATATAAAAT CGCGGCGTAGCGCACGAGGCTACCACGTGTGTGTGGGATATGAATTGTAGATATATGTAGCCTTACTCGGCAAGGGAACAGATTGTTTCCGGGATTTGAA CTCATATTTTTCGTACCACAAGAGAAGCAATACATTACTTTTTGGATATAAAAATCAAGATTGCTTATTATTGAGAATTGTTTTTCACAAAATATTTTTG ATATGATTGGTGTTGTTTGTAAGGGGGTCACAAGACCAACAACAACCTCAGCCACGTCCTCAGGATGGTTCTTCGCAGACGCAATCATGGTATCCTCCAT CTGTTTCTGCTGTGAGCTCCCCAAGTTCTTCTAGGCCTGCTACGCCAAATGCCTCTTCCTTTGGGTTGCACTCTTCTTCCCATGTTCCGCCTTCTGAAGC CGCTGGAGTTATTGCTGTTCTGAAAGACAAAAGTGTTGATGAATTACGGAAGCTTTTATCTGACAAGGATGCTTATCACCAGTTTTTACATTCACTAGAT CAGGTCAAGATTCAAAATAATTTGAAAGATGAACTTCACAAGGAGAATATGCAGCTTGTCGAGGAAAATCTACAAAAGGAACCCCGTATTGTTGAACTTA GGAATCAGTGTAGAATAATTCGGACAACTGAGCTAGCTGCTGCTCAGGAGAAACTGAACGAGCTCGAGAAGCAGAAAGAAGAAATGTTGAAGTTGAACTC TCCTGCCTCCCTTCTCCAAAGGATTCAAGAGGCTATGAATGTGACAGAAGAGGAATCCGAAAATCTGCACCAGCAACTCCTAGACAGAGAGATTGACCTT GCAGGATTTTTGCAGAAATACAAGAAGCTACGCACCGCTTACCACAGGAAAAGTCTCATTCATCTTGCAGCTAAAACATCAAACATATGAGCATCACATA CAGAATTTGAAAATTAAAATGTTACTCGTTGTTTGTCAAGTGTGTTTGATTTTTGTTCCATTCTTGTCTATATAGTAGTCACCTTTCTAAGATACATGGC ACCTATTCTAGTTATTGGCCGCTTGTAATCTTCAAAATTATGTGTATTTTCATGTTTAAGTAGTTTCATAACTGTTTTTTTGTCTTCAGTTTCTGTTTTT CTACCATGAATAAGATTTGTGGAAATTAGCTGTAGCTAATGATATCTTCACTATTATAGATCTGCATTTGTGATCTACATTTGTGTTACACACATATATA TATAGTGCATTGCC
• Tissue: pods
• Gene name: LI_gene_145828;
• Additional information: details;

Expression of Ll_transcript_433980

FPKM

• PAB: 25.3
• PNAB: 8.3
• PS1: 12.3
• PS2: 8.2
• PS3: 14.4
• PW1: 10.3
• PW2: 11.7
• PW3: 10.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_433980

• Blastp: Vacuolar protein-sorting-associated protein 37 homolog 1 from Arabidopsis with 71.68% of identity
• Blastx: Vacuolar protein-sorting-associated protein 37 homolog 1 from Arabidopsis with 73.1% of identity
• Eggnog: vacuolar protein sorting 37 homolog(ENOG4111UJN)
• Kegg: Link to kegg annotations (AT3G53120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429101.1)
• Pfam: Modifier of rudimentary (Mod(r)) protein (PF07200.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;