Id Trinity | TRINITY_DN46611_c1_g2_i4 |
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Name Transcript | Ll_transcript_433857 |
Sequence | TTTCTAATCTATAATCCAAAGTACTTACAATACATTATATTTTTTAAAATGTGGAAACTCCATAGTCCACACAAACAAAACTATAGAACTCTTATATAAT ATATATTAAAAATGTATTGTTGCCCGACGAGTGTCGGTTCAAGTGATAATGTATAGAACTCTCAGATTCGATCCCTGTGGACTGAAAAAATGTCCGTTGG GAGAGTTAGTCTCACATATCTGTAGATATTCCCGACTTACATGATTGTCTTCGGTGCGAGGACTCCCTCATTGTTACACTATTTAACGCGCTAAGGGTAA TAATAATTGTTGAGACACTAGATGCAGTGCAAGAAGAAAATGAGTTACCATCATAGTTTCATTTTCATTGCTACCCTTTTTCTTCTTCTTACTTGTAATG CTCAACTTCATGTTGATCATTACAGAAACACATGCCCTCATGTTGCATCAATTGTACGTTCTGCAGTTCAGAAGAAATTTCAGCAGACTTTTGTTACAGC ACCTTCTACACTAAGGCTTTTTTTCCATGATTGTTTTGTCAGGGGATGTGATGCTTCTGTGATACTAGTTTCAAGAAATGGCACAACTGAGAAGGATAAT CCTATAAATCTTTCACTAGCTGGTGATGGATTTGACACTGTGATTAGAGCAAAAGCTGCTGTTGATAGTGTACCTGGATGCAGAAATAAGGTTTCATGTG CTGACATTTTGGCATTGGCTGCTAGGGATGTCATAGCATTGGTAAAGTTATGTTCATTTCTAGATTTCGTGGTTTTAAATTGCGGTTACGGTTAAAATAT CTTTACTAATCGTAAAAGATTACGAGAAAATGTGGTCGATAGGATAGCAATTGCGGTCATGATGTGGTTGTGAAAACTAGTGCAATCACAATATTACTAA AACATGGAGGTGTGTGGTTCATATCATAGTTATCTGATACGTGGTTCTATGTGGTATGAGTGTGGGGACGTAGTACACAGTATGTTACCCTGTCAAATAC CGGTATCTGTAGCTCTCTTCATAGTTGTTTCTAGTGCTGTTTCTCGTAGATTTGAATCAACATTTGTTTCACCATAACAAATAACCAAGGATAACAAAAA TTCTTGTTTGTTGTAACTTACTCATATAAGTGAATATATATTATCAATTATTCTTCTTTTATTTTATTTAAACTATAAGTAAAAATTGGGTTCATTCCTT GAAGGGAATTAGTTCGCAAAAGAACCATGAATCGGTACGAGAGAACCAATTCGCGGTTCGCTATCAAAATAAGAGAATTGTGTTTCATGTTTGCAATTTT AGAAGTTTCCGCAACCACATCATAACCGCAATAGAGAGGTTGTTGCCTTTAGACCTGGATCGCGAGGTTTCAAATCCGTGAAACACCCTCTTCGACTATG GACTATGGAGTTAAAGCTACGTACACATATTCTCCTTATACTCCACTGTGGCCTCGTGCACTAGGTTACGATTTTTTTTGTTATTGTGGACTACAATTTA AAACATTGGTAGTAGTATACCGGTATTCCCAATTTTCCGAAGAGCCCATGAATTTGAAATGTATTACTAGTAGATCATCTATTTATAATTATAAGTAGTA TATATTGGAATTCAGAGAATAAGTGAAGAAGAGAAACAATGAGTTTCATTGATTGAAATTGATTTGTGAATAGTTGAATGAGTTTATAAAGAACCATGTT TTTATACAAGCATTACAGGAGGAAACTTAGCCTGACAAACTAAACAAAAAGGCTAACTAACTAACTAACTAGAAAGTAAAATGGATAACAGAATCAACTA ACTATATCCTTTAACGGTATATAGTGTATAGTCGTAGAGCCGGTCTTCCAGCCGAAAATCGGGTCCCGATTTCCCGTTGGAAGACCGGCTCTGCGACTTG TACCATTTCCACTTGACTTATATTTTAGTTGTGTTTACAATTTAACAGAGTACCACATGAACACTCATTTTTTGTTTCAGACAGGAGGACCATCTTATGC AGTAGAGTTGGGAAGGCTAGATGGAAGAATCTCTACAAAGGCCAGTGTTAATAATCATCTACCTCATCCTCAATTCACACTAACAAAGCTCATTCAAATG TTTGCTTCACATGGCCTCAACCTAGTGGATTTAGTTGCTCTATCAGGTATGTCATTCATAATGTGCAAGATAGTTATAACCTGCATGAGAGTCCGAGACT CGGTATCGTGGGTAGCGTTCGATAAACGTGACGAAACAAAACATACGGATTTTGCCGTGTTTGGTGTATTCTATAAATAGAACATATTGTTGGAGATATT CAAGTATGAAGTCTCACATTGGATACGATGGGAACAGTAAAAGAGCTTATAAGTGGAAAAGGCTAATAATGAAACCATTGTCTTAAGGTTTCAAGACGTG AGGTTTCACTTGTGGCTCTACACTTTTCTCATGCCCTGATAACAATGAAACTCCCTGGTCATGTTCGGGTCCAACACATATCATGGTAAGAACTATGAAC ATTTTGGTTCCACGACTTTCGTGGAACCAAAGAAAACATAACATAATTGTTCTGTTCGCGTATCAAACACTACCGAAATATGATATCCATTTGGTTTTCT TTGCCCAGAAATTCTAATCTAGATTGAAATGGTTGATGCAGGAGCACATACAATTGGATTCTCTCACTGCAGCCAATTCTCCAAACGAATTTACAACTTC AGAAGCAGGAACAAGATTGATCCAACACTTAACCTGGCATATGCAAAACAAATTCAGCAAGAGTGTCCAAAAAATGTAGATCCTAGAATGGTCATTGACA TGGATCCAGTTACAAATAATGTATTTGATAACAATTACTACAAGAATATCCAACAAGGAAAAGGACTCCTTTCTTCTGATCAAGCATTGTTTACTGATAG AAGATCAAGAAGCATAGTGAACTTGTTTGCATCAAACAGCACAGCATTTGAGAAGTCCTTTGTCATTGCCATGACAAAGCTTGGACGAGTCGGGATCAAA ACGGGAAAACAAGGCGAAATCAGGCGTAATTGCGCAATGGTTAACTGAATCAGTCATAGTTTCAAGGGCCATTGTCAAATGCTTCTTTCAGTTGTTTTGT TTTTGTCAAAATAGAGGCAAAGGAGGTTGAGTGAAATTCAATTATGGAACAACCTCTGAAGTTGGAGAGTTTGGTATTGTTGGTTTTGTTTGATCATTGT CTTCTTTAGCATTTAGTGAGCAAGGTCATTTGATTCACTCAGATGGTAATGTATATGCTATATACAACTTGCTGGTTCATTACAAACTAGTGGAAACTGA ATAATCTTCGCAATGTCAACCATGGTTTTAAATTGCAGTCATAATATGTTATCACAATTACGAAG BLAST |
Tissue | pods |
Gene name | LI_gene_145890; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433857
Blastp | Peroxidase 16 from Arabidopsis with 61.31% of identity |
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Blastx | Peroxidase 35 from Arabidopsis with 62.5% of identity |
Eggnog | peroxidase(ENOG4111S7R) |
Kegg | Link to kegg annotations (AT2G18980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447519.1) |
Pfam | Peroxidase (PF00141.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |