Ll_transcript_434661

Id TrinityTRINITY_DN46626_c5_g2_i3
Name TranscriptLl_transcript_434661
SequenceCTCCATCACCGGCTCTCAAATTAGGGCTCCGCAAACGCCCAACATAACTATCATCAGTTGCAAAATCACTCCCATCTCAACCTTCACTAATCGATTTTGA TGGCGTGCAATGGCGACGGTTGCCAATCCACTTGTTACAAAGACGAACAACCATGTTCTAAACCAATCGAATCACCAAACCTTATTAGTAAAATTTGCAT TAAGTGCAAACTCAACGACGCCGTTTCTGGCTATGGCGGCGTTGATGATGGACGCTTCTGCGCCGATTGCTTTCGAAGCAACTTGTTTGGGAAGTTCAGG CTCGCTGTTACTTCGAATGCAATGATTACTCCCACTGATAAGGTTCTTGTTGCATTCTCCGGTGGCCCTTCTTCAAGGGTAGCTTTGCAGTTTGTGCATG ACATGCAAGAGAGGGCGCAGAAGAACTTTGATGCGAGTAGAGATAGGTCATTGCCGGTGTTTGGTGTTGGAGTGGTGTTTATTGATGAGAGTGCCATTTT GTCGATTCCTTCTGGTGAAATGGAGGAGGCAGTTGAGGTTATTAGTTCGGTCGTGTCAAGCTTAGCCCCGCCAACGAAAGAGTTGCATATTGTTCCTGTT GAAAATGTTTACTCGTCAGATTCTAGTGATGGAAAGGAGAAGCTTATTAAACTAGTGGGTTCGGTTAGTGATCCAACAGGAAGGGAGGATATGTTGCTTT ATTTGCGGATGTTGGCCCTGCAAAAGGTTGCTTCTGAGTTTGGGTATAACAGACTTATTGTAGGATCATGCGTTTCAAGGATTGCTTCCCATGTGATTTC TGCCACTGTGAAGGGTCAAGGATATTCATTACCTGCAGATATACAATATGTTGATGCTAGATGGGAAATTCCCGTTGTGCTTCCTCTGCGTGATTGTTTT GCCCAAGAGATTAACATGTTTTGCCACCTTGACGGTCTAAAGACTTTTCGGTTTTCTACAGTTCCTTGCTCTAGTATCAATAGCTTGGTCTCATCTTTCG TAGCGTTATTGCAGGTATAATTTGTTTTGCTTGTGCCATACCCTTTTTATAGATAGTGGGGACATATTTAATGATGGGTTTAAACGAAAGCATGTCGTGT GACCTGTTTAATGAGTGTTTTAATCCGAGCTGTTGTTTCTTATATATGCAGAGATGTGGTATGTTTTTATAAGTACATTCTGATGACTAACTTTATGTAC AATAACTTATTATGGCTGAAAAAATTCATTTGAAGAGCATTATTCCGCCAGAGAAAAGAAGTCTCTTCTATTGTGAGAGTAAGGTTGTATACATCTACCC TCCCCAGACCCCATTAGGTGGGAGTCTTATGCTCCGGGCCACTCGGAAGAGCATTATTCTACTTCAGGCTCATGAAGCTTATTGATTGGATATGATTTTT TATATAATGTATGCCTGCTTGCTTGTGGAAGTTGATTTGCCGGATTACATATTCAACACAAAAGTTCAAGTATTCAATATTACGGCTTTGATAGAGTAAC ATGCTGATGTTGATTAGTTTTCTCCTTTCTATTTTATTAAAGCCTAAATTTGTTATTTTAAACGTAATTGTAAAGTCATTAATTGAATTCCAGTTTTACA GGAAGAAAATCCATCTCGAGAGAGCACCATTGTAAGAACAGCTGGGAAACTTATTCCCTTCCAATTCAATAGGATTCCCGAGATCGTTGATGGTAAGGTT CCATTGGCAACTCGAAGACGCCAAAAGAGATATAATCTCAAACCCAATGATTCTGTTTCCTCAGAATCTTTCTGTCCTCTCTGCAATAGCCCACTTGACA AGTCTGAAATTGTTGATGCAAGCAATGTTGATAGCAGTAGAAGCAGTGACATTTTTTACAGTGCCTGCTGCTCAAGTTGTCATTTTCAGATACTTCCAAG CGATTCCATATCCATGGAGCAATTTTATAAGGATTTACCTCAACCAGTGCTTTCCCGAGCAAAGCAAACCAACAATGGCAATTTGAGTCTGCTCAGGGAA CAAATCCAAGATTGCTTGCTTTCAGATTGTGAAGATTAATCTTAAATTTAGTTGCCAACATTTAGACTCTTTGAAGAGGGCACAAATTCTGGCTTTGGTG AACTTTTAGCCTCTGGCAAAACTAAGAGCATTACAGTTCACCACTGAGATTCACTACTGGCATTCCTTCAGGACATGGTTGTTGTTGATGATTATCTGGG ATAATATTTCAGAGTATATTTGAGTATTAATAATGTGATAGATGACATAATTGAGTTTTTTCATATTCTTGATTCATAAGAATCAGTTTTCAAGCTTTTG ATTAATTTAAGTGATTATTTGCATCCATGTACCTAGTGGAAATGACATTGTACTCTAGATTACATATGTTATGGCAAATGTTGGATCATGAAAGAGGGTT GTCTTAACAAAGTTCCTTTAAGGAATATAAAATAAAGATTCAACATTGGAAGCT BLAST
Tissuepods
Gene nameLI_gene_145990; 
Additional informationdetails; 

Expression of Ll_transcript_434661

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_434661

BlastpCytoplasmic tRNA 2-thiolation protein 2 from Arabidopsis with 61.09% of identity
BlastxCytoplasmic tRNA 2-thiolation protein 2 from Arabidopsis with 60% of identity
EggnogPlays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation (By similarity)(ENOG410YGU3)
KeggLink to kegg annotations (AT4G35910)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444040.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;