Id Trinity | TRINITY_DN46630_c0_g1_i5 |
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Name Transcript | Ll_transcript_433817 |
Sequence | AAATAATGACCGAAACAAATTACCGCTATAAGTCGTGGAATATCAGATGTGCTCCCAACTTAAACTCCCTCAAACTTGAAGACAACGTTAGAATGCTTCA ACTCAATTTCGCACAAACCTCGTAATTATTTTTTCTGTGTGCCTTTGATTTGATAGGGTCCCAAAACGACAACGTTATACACCACCGCCACAACCCATAA CCGCCGTCGTCGCCGTCTCCATCATCTGGCAGCAACCCCGGCGTAACGGTTTCCGGGTTTGGTTATTCTCACCTTAAAGTTCCAATCTTTACTCACCACG ATGGCAAAGGGAACACCCTCAAAGTCAAACATCGCTATAATTCACCCTGATCTTGGCATAGGTGGAGCTGAAAGATTGATTGTGGATGCAGCTGTTGAAC TTGCATCCTATGGTCACAAAGTTCATATTTTTACTGCACACCATGATAAGAATAGATGTTTTGAGGAAACTATTTCTGGTACCTTTCCAGTCACTGTATA TGGTTCCTTTCTTCCCCGGCACATATTCTACCGTCTCCATGCCTTGTGTGCATATCTTCGGTGCCTGTTTGTTGCTCTCTGTGTGCTTTTTATGTGGCCC TCATTTGATGTCATACTGGTAGATCAGGTCTCTGTAGTTATTCCCATCTTGAAACTTAAAAGGTCAACAAAGGTTGTATTCTATTGTCATTTTCCGGACC TGTTACTAGCTCAACATTCAACATTCCTCAGGAGGATGTATAGGAAACCGATAGACTATGTAGAAGAAATAACAAGCGGGATGGCTGACTTGATACTTGT TAACAGCAACTTCACTGCGTCTACATTTGCGAAAACTTTTAAGCATCTCAATGCTAAAGGGATTCGACCTGCCACTCTATACCCTGCTGTGAATGTTGAT CAGTTCAGTGAACCCAATTCTTTTAAGATGACTTTTCTTTCCATTAATCGTTTTGAAAAGAAGAAGAACATAGAATTAGCAATTTCAGCTTTTTCTATGC TTCACTCATCTGAAGGGGTTCTCAAGAATCAAGATGTTAATGCTTCCTTGGTTATTGCAGGAGAATGTAGAGTACTTAGAAGAGCTTAAAAATTTAGCTG AAAAGGAAGGAGTCTCAAATCAAATAAGATTCATCACATCTTGCTCAACAGCTGAAAGAAATGCTCTTCTCTCAGAATGCCTATGTGTCCTTTACACTCC GAAGGATGAGCACTTTGGCATTGTCCCTTTGGAGGCAATGGCTGCTTATAAACCTGTTATTGCATGCAATAGTGGTGGCCCAGTGGAGTCAATCAAGAAT GGTGTAACAGGTTTCCTTTGCAATCCTACACCACAAGACTTTTCTTTAGCAATGACTAGATTCATAGAAGATCCAAAAGGAGCTGAAAGAATGGGCAAAG AAGCTAGAAGCCATGTTGTTGACTCATTTTCTACAAAGACATTTGGCCAACATTTAAATAGATATATAGTTGACATTCATAGGGGAAAGGAGGATTAATT TCAACTTATGAATATAAATTAATAGCCTGCAAAGTTATATTTACAATATGTACTTTGTTATAGCCTGCAAAGTTTGATTATAGAGTTGAGGATTACATGT TCAATGTAGTGAGGCTTTCAATTTTGAATATTTGCTAATAATACAAAGACATTTCATAGTTTATACTTTATAGGGGTATCACTTCTGCTACTGAAACCAT GTACCAAGAAAATGAAATGTAGCTAGATTTCTACAAAAACTTGAT BLAST |
Tissue | pods |
Gene name | LI_gene_146052; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433817
Blastp | Alpha-1,3/1,6-mannosyltransferase ALG2 from Rhizomucor with 48.85% of identity |
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Blastx | Alpha-1,3/1,6-mannosyltransferase ALG2 from Dictyostelium with 46.3% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443872.1) |
Pfam | Glycosyltransferase Family 4 (PF13439.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |