Ll_transcript_434291

• Id Trinity: TRINITY_DN46638_c0_g1_i9
• Name Transcript: Ll_transcript_434291
• Sequence: GTCAAAACCTCTTATGTTATGTAATAATGGCCCAAAGAGTGTGTTTCAACATTCCTCACTCCCATTTCTCAAACCTCATTCCTTCTCTCACCACTACACT GCAGTAAAGTGAGTACGGAAATGGCGTTCAGAGGGAAGCAGATGATGAACAAAGTTCTCAAAAAAGTTGGAGAAAAGAATTTGGCCCCGAGAGTGAAGGA ATCGTTGGAGAAATACATACCCCAAAGCAAGGTTATCATGGGCCGTGCAAAACGTGGTCTCTTCTCTGGGCGACACATTCAGTTTGGCAACAATGTCAGT GAAGATGGCGGTAACAAGTTTGTATCCGATTCTTGATACACTTTATTTTTGTATTTTCGTGGGTATGTTCTGTGATGTTTAAATGTTTTGGAGTACATCT AGATTTACCTGCATTAGCCGGTATTATATTAAATATGTTCGGTCGTAAATTGTGCAAGTTTCTGTCTAGACGTTTATTATAACTGAAAAGAGATGAACCG TGACTTTTAATTGATTTGATTGGCAAATAGCATTGAACCTTTATCCATTTGTATAAATGAGCTACATTTGATTTGTTTTGGACTCGAAACCGTTCTATTA GTGGTTTACATTTGTGTGATTTAGTCAATAGTAGTTTTTGTTTGCTTCAGAATGGAAGCACCAAAATACATTCAGAACCGCAATTGATTTTTCATATTAA GATGATCAAATTTTATTGAAAGATCATTTATAAAATAAAAGAATTTTATGTTAGAGTTCAGTTTATTTCAAGATTCTTAACTTTACAACATTAAGGATCA TGTATTCCAAATTGGAAATTAGAAGAGTCAAGGAACTAATAATCATGGATCCATTAGACAAAGAATATCATGGCCCGTCCCTATGAGTCGGAATTGTGTT TGGACGACAAGACCAAATCAGATTATAGAGCAAGATTTGATAAGTACTAGTCAATAAATTGAATTTGTATGATTCACTTGCTTGTTGCTTCTTCACTTAA TGAGATATCGTAATCAGATGCACGTGGAGTCCCGCGAATTCCATGGTCGGGGTGATTATATTATGATAACTTTCCATTAATAGATTTCCTCCAACTGGGG CTAGCAATGGCTAAATTTTCAGCAATGGACCCTTAAATAGTGATTATTTTACAATTGAGTTCTAAAATTTCCGTCTTAACCTTTTTTTTAATGGTTTATA TCTACAACCCTTGTTATAGAATCGGTCTTCTCAATTCATTTGATGATTTCCAAAGCTTTGATGATTTCTAAAGCTTTCATTTTTCGCTTACTTTCTGAAC ATGCAATGCATTTAGTAATCCAAGATCCTGCCTGAGAATTGCATGAAATCTTTCCTACTAAGCTAGTCTTTGTGTTAGCTTAGTGATTCTATCTCAGATC AGAACTTGCATTTTATCTTTCGGTTACTAAATTTTGCTTTAGGAAGTTGTTTTACCATTTAATGAGACAATGTTCTTTCTCTAATGATGTTTGACAGGAC AAGGAGAACATGGAAACCCAATGTTCAAGAAAAGCGGCTCTTTAGTTATGCCCTCGATAAGCATATCCGAATTAAAGTCACCACCCACGCCCTTCGTTGC ATAGACAAAGCAGGTGGCATTGACGAGTACTTAATCAAAACTCCTTATCACAAAATGGACACAGAATTAGGCCTCTTCTGGAAGGCGAAGATTGAGAAGC TGTATGAAGAACTTGGCAACAAGGAAGTTGTATTCTTTTCACCGGAGGATGAAGCCAAGTTTGAGCAGGGCTTCAAGGATTTGAAATTGTCCGAAAAGGA AGCGCGGAAGGAAATCAGAAGAAAAATGTATGTTGGGATGAGCAAGAACAATGTGATTGAGGAAGAACATAAAGATGATGATCAATCTAAAATTGAGGAA GAAAAATCACATGATGCACCAAAGTTGGTTCCTGTTTCTTATGTGATAGCTGCTGATAAGCTCAAAGTTGGGAGTGTTGTTTCTAATTAGTGCTATATTA ATTGAAAATCACTTTTGTAAGAGCCATTTTTATTTTGGTTTTCGTTCAGACAATCTACCAATAAAACTAATGATGCTTTCAATTATTTTGATCTGTATTT TTTTACAATGGTGGTTTCTTCACTCATGTTCTAATGCTAAAACTTTGTGTAGTGAGTGTATTTGTCCCAAATAATATGACTTTATATCTTCTAGCAAGAC ACAATTATCTGAAAAGTACAATGTGACTTTTGCAGGTCCAAAATGTTCATTTTAATGTGGTATTTGACCACTTTCAATTTAGT
• Tissue: pods
• Gene name: LI_gene_146098;
• Additional information: details;

Expression of Ll_transcript_434291

FPKM

• PAB: 0.9
• PNAB: 10.6
• PS1: 5.5
• PS2: 5.6
• PS3: 6.3
• PW1: 7.6
• PW2: 6.2
• PW3: 5.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_434291

• Blastp: 50S ribosomal protein L28 from Magnetococcus with 47.92% of identity
• Blastx: 50S ribosomal protein L28 from Magnetococcus with 47.92% of identity
• Eggnog: 50s ribosomal protein L28(COG0227)
• Kegg: Link to kegg annotations (Mmc1_0815)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419625.1)
• Pfam: Ribosomal L28 family (PF00830.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;