| Id Trinity | TRINITY_DN46640_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_433888 |
| Sequence | CTCTCACTAACTTTCATTCTGCTACCAAAGAGGAGAAGGCTTAATTGAAAACTACAGAAGAAGATTTCTGTATTATTATTAAGTTATGGTAAAGCCAGAC TTGGTTTCTTCTGAGAAGACCACTGTTCAAATTGAGGACAATAATGATAATAATAATAATAATAACAATAATAATAATAGTTATCCAAGATACATGCGGG GCATACTTCATGTTCTTAACTATCAACATTGGCATGTCAAAAGTGTGTTACATCATAGAAGAAATGGCAGATATAAGAGAAAAACAAGTTTGGATAACCA CGGTGAAAATCAACAAAATGAAGATGCAGAAGCAGAATCCCTCCTTGTGGAGAAACATGGCAGAAAGTTGAGTGCTAAAGGGAAAAGTTGCACCAAAAAT CACAAGGGACAATGCACCGAAGAGTGTCTACATTTAGTGTCCTCAGGAGAAAACCAGGACAATAGTGAGAATGCGCTTGATTTGGAGATAGATGGCATGT CAAAAGAAGCCTCCCTTAACCAAACACAATTGGAAACAGACAAGCTTAAGAGAGACACTTCCAATAAACTTAATGAGCATAGTGATATATTGGAGATATT AAGCACGGAGAAGGATTTACTCCTCAAGATTCAAGGAGATTTAGATGTCGGCATGAAAAAACCCCATCAAACTTCCAAAGAGAATCATAGATTGATGAAA TCAGAGTCGTTTCCCTTAACCAAAGATACAGTGATGAAAAGCATAGGTACTCCTACCTTTAGACACAAGCAAACTGAAATTTGGGCCTTCTCCAAGGGAG AAAAGTTGCTTGCCGGTGCTCATGCACCAAAAATGTCTGCATCTAGTTTTGTGGAAGATATTTCTTATGAGAAGCAAATGAAACAAAAACGGACCTTTTC TTCACGGTTTTCTCAAGGAAAAAATCACAGAGGGTGGAATCAAATGGTTCTTCATAGCTTCAGAGTTATAAAGCAGAAGATAAAAAGTGCTCTTGCTGAA AGAATCTACCACAGAGCTTCTTCACCTGAATATAGTACTACCAATGATGAGAAAGAGGGCTCACAAATCATAGATGATGGCGTGATTCAAGAGTACGAAA AGAATGAAAGCTCAAATGAGATTACAACATCTGATTATGCTTCCAACAAAGATGAAACTCGCCTCATCCGAAGAACATCCTCTCTAGATGGATCGCTAGA CAGATATACTCAGTTGTTTGAGAAAACCTTCAGCAATGATGTCAACAAGTATAAATGCTTAAATTTAATAAATGAAGATAAGGTTCTCAAGAGTGAAAGT CCTTCTAATTTTTCCAGAAGAAATTACTCTCTGCCTAGTCTCGAGTCTTTAGGCTTCATCCTACATGAGGTACTCCATGATAGGAATTTCGGGCATACAT TGGAAACTGATAATCATGTTCGAAGAAAATCGCTGAGTTCTTCTTTACAAACTGCCAAATTACTTGATCAGATTGAAGAGACTGAAATCACGGAAACAAT AGAAGGAGATGGCAGAGATATGAGTTCTGGTCTTTTATCTGGTAAGATTGTGGACGAAATTCAAAGGAAGGACTCACATGAGATAGCATTAGAAGATGGA AATTTCCTCCATGAAAATGTGGAAATAAGTACTGCCATCCATGCACAAGGTGGCGAATTGAATCCGCGAAGCTCTAGCATGGAAGAATTGGAGAGTGACA ACCATTTCCTGCTCCATAAATCAGTTACAGAGAATGATTCCAATTTCAAATACGTGAAAAAGATTCTCGAAGTTTCCGGCTTCATGGGAAATGAGCAGAA CCAAATGTGGTACTCATTAAACCAGCCTCTAAAGCCTTCCTTACGTAAGGATTTAGATAATGAAATTGAATCTTATGGAGAAGAGATTGCAAGCAACTAT GATCACCAGCTTCTATTCAACTTAGTTAATGAAGTGCTCCTTGAAATAGATGAGATATCACCAACTTACTTCCCTATACCCTTCTCCTTCAACCGAAAAA CCCGTCCAATGCCGAAGGGACAGTATCTTCTTAATGCTGTATGGACTATTGTTAGCTCATACCTGAGCTTGAGACCAGAACTAGATCAGACATTAGACGA TGTTATAAGTCGCGATTTGGCTAAAGGAAGTGTATGGATGAACCTCCAACAGGAAGAGGAGTATGTTGCACTTGAACTTGAAGAGATGATTGTGGATGAT TTATTAGATGAACTTGTGTTCTCATGAAGTTTTGTTTAGACTAAGGTTGATGCATCATAGATTTAATGCTGTAGAATATTGATTCTTTTTCAGTGTGTTT CAGTTCCTAGTACATTTTTTTTATATTTTTCATGGAGAATAGGATTCATGAGTATATTATTTGATTTTGTAAATAGGGTTATGGTAGATGTCATGGAATC TTGGTGTTTGGTTTACTTGAATAATTTTCATGTAAATGATATATAAGACTGTACTTATTGTTGCTTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_146106; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433888
| Blastp | Protein TRM32 from Arabidopsis with 30.24% of identity |
|---|---|
| Blastx | Protein TRM32 from Arabidopsis with 46.67% of identity |
| Eggnog | NA(ENOG410YHUX) |
| Kegg | Link to kegg annotations (AT1G07620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435808.1) |
| Pfam | Domain of unknown function (DUF4378) (PF14309.5) |
| Rfam | - |
| GO | - |