Ll_transcript_434348

• Id Trinity: TRINITY_DN46647_c0_g2_i5
• Name Transcript: Ll_transcript_434348
• Sequence: ATAAGATTACTCAAGAACACAAGTGACTTAAGCTTGAATATTAAAATTGCCGCATGAATGACTATATATCCGTGCCTTCCCCAGTGTAGAAATCATCATC ATATTAATTCCAAAGAAACACGAAATGGGTAAGTGGTCATGTTCTTTGGCCTTCCTATTTCTCTCTTGGCTCCAACTTTCAATAATAACAACACTACTCT CCAAAGCCATAATAGAAGTGAAGGGTGTTCCACTTCACACAGATTCAAGGTGGATAGTGAACGAAGATGGAAAAAGGGTGAAGCTAGCATGTGTGAATTG GGTGTCACATCTTGATGCTGTGGTGGCTGAGGGGCTTAGCAAACAGCCTGTGGATGTGATTTCCAATAGAATCAAGACCATGGGTTTCAACTGTGTTAGG CTCACTTGGCCTATTTTCTTGGCCACTAATGACTCATTTGCTTCTCTCACTGTTAGAGACTCATTTCGGAGCCTTGCTCTAATTGAATCTGTTGCTGGGG TCCAATCTAATAACCCTTCCATCATTGACCTTACCCTCATCCAAGCTTTCCAGGCCGTGGTAAAAAGTCTTGGCGACAATGATGTGATGGTGATTTTGGA TAACCACATAACCAGGCCAGGGTGGTGCTGCAGTAACAACGACGGAAATGGGTTCTTTGGTGATCAGTATTTCGACCCAAACATGTGGATACAGGGCCTC ACCAAGATGGCCACTATTTTCAATGGAATGAACAATGTCGTGGGTATGAGCTTGAGAAATGAGCTTCGAGGTCCTAGACAGAATGTCAACGATTGGTACA GGTACATGATACAAGGAGCAGAAGCAGTTCATGCAGCAAATCCAGATGTTCTTGTTATCTTGTCTGGCCTAAGTTTTGACAAAGACTTATCATTCATTAA GAATCGACCAGTGAACCTCTCATTCAAGGGAAAACTAGTATTTGAAACTCACTGGTATGGTTTCAGTGATGGTCAAGCTTGGTTATCAGGGAATCCAAAC CAAGTGTGTGGACAAGTGGCTGGAAATATGAAGAGAAGTTCTGGCTTCTTGGTGGACCAAGGATGGCCATTGTTTGTTAGTGAATTTGGGATAGACTTGA GAGGTACCAATGTGAATGATAATAGGTACTTTAGTTGCTTCATGGCAGTGGCAGCCGAACTTGACTTAGACTTTGCTTTGTGGACACTAGTTGGTAGTTA CTACTTTAGACAAGGGGTTGTAGGAATGGAAGAGTTTTATGGGATTCTCAATTGGGACTGGACCCAGGTTAGGAATACTAGTTTCTTACAAAGGATCTCT GCTCTTCAACTTCCATTTCGAGGGCCAGGCATAACAGAAGGTAATCCACACAAACTGATTTTCCATCCATTGACGGGTCTCTGTGTCCTAAGAAAATCAA ATCTAGATCCATTAACTTTGGGTCCCTGCTCTAGTTCTGATGGGTGGAAATACACACCACAGAAGATACTATCAATAAAGGGTACATACTTCTGCATACA AGCAGTGAAAGAAGGAATGCCTGCAAAACTTAGTATCATATGCTCAGATCCTAACTCCAAATGGGAAATGATCTCAGATTCCAAGTTGCACCTCTCCACG AAAGTTAGTGACGGTTCTAATGTTTGCCTGGATGTAGATGCCAGCAACATCATAGTGACTAATGCATGCAAATGCTTGGGTAGAGACAGTTCATGTGACC CTGGAAGCCAATGGTTCAAACTTATTGATAGCGGAAGGAGATCAAACTCGAAACTATTCAGCTCAACATAAATTTCCTTAATAGAAACATCATTGTACAT TTATCTAACCATGTAAGCGTGTACTAAGCATTAGTATCCTACTAGAACAACATCAATGCTACAAGTATATTCATGTGAATACTAATATTGATTCAGGGAT TCTATTATAGGCTTTTGGTCCTTTCTCTGTTATTTCTTACTCATTAATGCATGTTCAACAATGTTAATTTTCGAACACAACAACAACTAAC
• Tissue: pods
• Gene name: LI_gene_146138;
• Additional information: details;

Expression of Ll_transcript_434348

FPKM

• PAB: 239.2
• PNAB: 8.9
• PS1: 21.5
• PS2: 21.8
• PS3: 33.9
• PW1: 6.1
• PW2: 12.7
• PW3: 12

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_434348

• Blastp: Endoglucanase from Paenibacillus with 23.88% of identity
• Blastx: Endoglucanase from Paenibacillus with 23.88% of identity
• Eggnog: Glycoside hydrolase Family 5(COG2730)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464045.1)
• Pfam: Cellulase (glycosyl hydrolase family 5) (PF00150.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;