Id Trinity | TRINITY_DN46650_c0_g1_i20 |
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Name Transcript | Ll_transcript_433712 |
Sequence | TATAGATCCTCCTCCCAACGGCAACAACTCCGCCGCCACCGCTACCGCCACCGCCACCACCGCCACCGTCAACCCCTCTCGAATCTCCGAATCTCTCAAG CTCGAACACCAGTTCTTGAGGTCCCCTCTCGAGCACTTGAAGAAAACAATCCGAACTAACCACCGCGCCGTCGAGAAAGAGCTCTCCTCCATCTTAAGCG GCGTTAACGACGCTGCTGCTGCCGACTTCTCTCGTCACGACGCCGTCAACCACCTCAACTCCCTCATCTCCCGCCTCCATGGCCTCAAGAGGAAGGTCAC TACTAAACCTAATTCCCAAATTATTTTGATAAATTAGGACATATCTGCATGTTTTTGAATTAAAATTCAATTCATATTCTTTCATCATGAAATACTGTTA TATGAAATTCAATTCATACTGTTTTATTGAAAACATATACTTTCTGTAACTTTATGATGATGATCATTTGTGAAATATGTTAAGATAGAAGAAGGAAATC TGGCAGAGGATATTCAAGCGCAAAGCTGCCGCATACGCATTGATCACTTGAAATCTGCAGATGGAGAAAATATGTCACAATGGAATAACACTCGCTTGAA CCGAATTCTTGTTGATTACTTGTTGAGGATGTCATATTATGGAACTGCAGCCAAACTTGCTGAATGCACCAACATACAGGATCTTGTTGACATTGATATA TTCCAAGAAGCAAAAAGGGTTATTGATGCTTTGCAAAATAAGGACGTTTCACCTGCCCTTGCGTGGTGTGCTGAAAACAAACCAAGGCTGAAGAAGTCCA AGAGCAAATTGGAGTTCCAGTTGAGACTTCAAGAATTCATAGAATTGGTAAGAGCTGAGAACAATTTGCAAGCCATTACGTATGCTAGGAAATATCTTGC ACCATGGGGAGCCACCCACATGAAAGAATTGCAGCGAGTCTTTGCAACAATAGCTTTTAAAAGAGATACTGAATATGCCACATACAAGGTAAGATTGCAT CATGCTTTAGGGTTTTTGTGCCTTAGTTATAAATATTTCTGACCACTTGGCAACATTAATGATATTTAATTTACTGTTGTGCATTAGATTTTAATAATGC TAAATGCAACATTGTCAGGATTATATTTACATCAACAGCTGTTAGAATTACATGATTCACTATTCAGATTTCATGATTTGATAACATTCAGTGAACCAAG GTTCATATCTTGTTGTGAATCACAGATGGTTTTGAATCAGAGCAACTCTGTGTCATAGGTGGATGATTCAGCGAGTCATTATCACCCCACGTTTTCTTTT CAGTTTCCCCCATTAATTCATATCTGAGATTTTGAAGGGGGTAGAGAGGCTTAAATTGTTAAATAAAATGAATTGAGGTGTTATGTATCACACCCTGTTT CTTGCTCTGCTTCGTTTGGAGGGGTAGGGAGGTCTTCTTTGTGTTCATGTTGGAGAGCATTGTTCTCGTTGTATACTTATGACTTATGGTATTATGGGAG TTTGCTATTTCCTAAGTAATATGTAACCTATAGGTACTTATTTGAGATATTTGACTATCTTGTTCATGTTTTTAGGTGTTGAATCATGTAAATTTAAGAT TTATTTTTTTGTTGATGTGTTTCTCGATCATGCAATATGTTATGATTCAGAAATTAAGCGAACAATTCTTGATATGCTACACAATTTGAAATCCATGTTT TATATAATAAGAGTAATTTTTTTGGAAGTGGACATAGCGAAGTCATTTCGTTTCGAATTTTAGTTAAACAACATACTTCATGGTAGAAGAGTGTGTAGTT CATCAAGTGTCGATAATTTTCTTTGTAGAAAAGAGAATGAATTACAAGCAATGTGCTAATGACTCTATTTATATGTAAATGAATTGCAAATGTTTCTCTT AGTTTTTGTATTTGTTAGTAGTTGTGGTTGACTACCCAAGCTAGCCCTAAGCTGTTTTAACAATCAATATCATTCGCATCATGCATCTCTTACCTATTTC AACTACAGCTACTCTGTTGATTATGTTAGGAACATGAATATTTATTGACATGAATTTTGATTTTTATGTGATCACTTGTTATCGTAGAAAAAATTCATGT CTGCGGTATTTCCAGTGAGGTCTTTCAACATGATATTGGTCAAACACAGCATTTTGATACTTTTTTATTTGCTGGACTTTTTGCTTAATATTGCATTATT GTTTATTCATTGGGAAGTTCCATTTCAACACTTGGTATATTTCCATTCCCATAATATTTTTACAGGTCTTATTTGAAGCTAAGCAATGGGATTTTCTAGT GGACCAATTCAGACAGGAATTCTGCAAGGTATATGGCATGACTTTAGAGCCTTTGCTTAATATCTATCTGCAAGCTGGCCTTTCTGCCCTCAAGACTCCG TATCCTAACAACTTAGTAATATTTTGCTAATTGCCTCCTTATTTAACTACTTTTCTTTGTTGGCTTGAGATAGTTTCTTTAAGCGAAATGCATATGATAG TATGATGTGCTTTATCATTCTTGCATACATAAATCTGAAACCCCTTGGACCCTCCTTATCTTCTTGTGGTACTTGATGGAAGCTTATCAGGTAGTCTATT AAATATTAATTTGAGTTCCGTTGGTTGGGGTGTCACTATTTCTGATAGCATCTTGCAGTCCTCCATAATTAGCAGTCCTAGACCATTCAACAACAACAAT CAAGCCTTAGTCCAGTACCATTGATTGTATGATATTTCGTATGCCATTTATTAGTAGTAGGGTTCTGTCACTCTTGTGCTTTTTTCTTTACTCCGTTTAA CGGAAGATTTCAAAGCTAGTACCAATAACACTATAGCCTCTTCCATGGCTTGCATTTTGTCTGTGTTGGTGGTATGCATTGTCTGAGCTAGCTCTGTTGA GATACACCCCTTAACTTGACAAAGATATTGTTACGAGGATGATTGCACAAAAGAGGACCCTCTATCGCAAGAGTCCTTCCGCACACTTGCCATGTCACTA CCTTATTCGAAGCAGCATCACTCAAAGCTTGTTTGCTATATAAGTAAGGAGATAATGGACACTGAGAATCCACCCCAAGTCTTGCCCAACGGATATGTTT ATAGCACTAAGGCTCTGGAAGAAATGGCTAGGAAGAATGATGGTAGAATCAAATGCCCAAGAACAGGTTTTGTTTGCAACTACACAGAAGTGATGAAGGC ATATATTTCATAAATCTACATGATGCTTAGGCTTGATGATGCCTCAAGCTACTATGCTTGTCTGGTTTGAATTGTGTGTTAGATTACTCTTATGGGTTTC TATACATTTACTTGTGTTGTGGCAGGTGTTGACTTAAAACATGTACATATGTAAGATGATGTTTCAACCCTTACTGGAATATGACAAACAAGTGAATACA TTTTAGTAAAAGATGTCATGCCACATAGATTTGAACTAATGCATTTCAACCGTATATATTATTAC BLAST |
Tissue | pods |
Gene name | LI_gene_146143; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433712
Blastp | Macrophage erythroblast attacher from Rattus with 44.93% of identity |
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Blastx | Macrophage erythroblast attacher from Rattus with 43.64% of identity |
Eggnog | Macrophage erythroblast attacher(ENOG410XPGU) |
Kegg | Link to kegg annotations (298982) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453489.1) |
Pfam | CTLH/CRA C-terminal to LisH motif domain (PF10607.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |