| Id Trinity | TRINITY_DN46652_c8_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_434845 |
| Sequence | GACTCTTATATATCTGTTCTTGTTACAAAACATAAAAAACCAAGGAAAATAACTCAATATTGGATTCGCTATACATGTGGTGCAGTTGGTCTGTCTGCTT GTTCCGTTTGGCTTTTACGACATAGTAGTTTGACAGGAAGTTCTGATCTTGATAATTGGGTTCAGGAAGCTAAGGATTCAACAGTTGGCTTCTTTAAGGA TCACGTAGAGCAACCGGTACATTTCTTTTTTTTATGTACTGATGTTACATTTTTTCCCCTTCTCCCCAGTCTGTGAGAACATACTCTTCGAAAAAATAAA GGGGATTGAAATCAAGATATCTTTAGGATGTTGGTGACTGTTATTCAATATTTTGAACATCCTTTTGCTTTTAATCTATTGATGATCAGTATTAACAAAG TAATCATCCTAAAGGACTTTGTTCTATGAGCACTGGACAAATCTCTGTTTCTTAGATATTCTTCCACCTTCTTCACCCATTTCTTTAAATTTTTGAACAG TGCACCTTATATATTGATTTTGATTTTAAAATTGGTGCCAAATTGAAACATGAAATAAGGCTTGATATTTTATAGTGAATATACTGAATAGGCTAGAGTC CATTAGGTAGATACGGCTGAAGTCTCCAAGAAAAAAGAAAAATCCCTAGAACAATATTTAATACTTGAAAAGCGTTATTTCTTGTTTTAAATTAGTAAGC CTAGAGTATTTCTATTCTATTTAATATCCTAATACTAATTATTCTACTATAATTGTCTTAAAACAACCAATTGTGTCATAATAATTTCCTTTTCAGTAAT CCCTATAAAAATTACAAGTTAAACGTGAAGTTTGTATGGTGCTATCAAACCCCCAGATTCACCAAACATTGTAATATGTAATTTTGAATATATATTGATA TAACCACTGTCCAGCTTTTGTCCATCAGAGATGAACTCTTTGAGACATTCAGGAAGAGGCATCAGGGTATTATGGACCATGAAGAGGTGCAGTTGACCTC TGACTCATTGCACAGGTTATTGATTAAATTCGTTGTCATTCCTTTTCTCCATCTGAATAGTAACCTATATGCAACCTAAAGTGTACACAATATTATTTTA CATAACTGTTGAGATTTTTGTATTATGTTGTTAATTTAGTCACTCTATAATTAATAATTTATTGTGGCAATAGTTCTGTTACTTTGGTAGTATTGTTCTT TGTAATATAAATTGTTGATTTTTTCAACTGAAGCAAGAACTTCCAAATATTAATAATATTGTTAAAGAAAATGAAATTATATCATGCTTCCATTAAAATT ATGCTCATTGATCTTTCTACGAACTTGTAGATTCTGTATATACCATCTATGTATAGTTTGATAATAAGTCATTATATTAATAATTTGGTCACAATTTAAA ATAAGCAATCAAATGGTTACTGATTACTGAGCTAATATTACAAATTTTCACGAAACATAGGTTACACAATTAATAGTTATTTTTAGAGACTAGTATATGT AAGATTCTTGTGGATCATGGAAGTTTGCTTCTTGGAATCTTGGTTAAAATGCAATTATGCATATTTATGATTTTACTCACCTGTATTTTCTGCATTCATA ATATGATATGTATATATATATAAATTTGCGCTGAACCTTCTTTGAAGCTACTAGCTAGTGATTGTTTGTTTGTAGGATTAGGACCAGCATAACTATGCCT GTAAAATTTCCAGAACCTGAGATGTGAACATTCCTATGAGTTGGATGTAGTTCCTTCGCCTTGAAAGTTGAAACTGTTTCCATACATGAGATTAAAAAAT AAAGAATGCATTTGTCCGTAAAAGCTATTCTCTTGAAGAAGAAAAATTAAGTTTCCTATTTAAGTTGCACCAGTGAATGCAGGATGCTAATTTTTCTGAT CCTACCTTGATAATTTTAAATTGTTTGTTTTCTACCGTGATAATTTTAAAATGTCTTTTTTCAGACTTCTTATACCCTAAATGGAAATATAGTCAGTATT TGTTACCAGTCAGTCTTAGAAGAATCTTGGGCTTTTGGAGATGACTACCCTTCACACTACCAATTTGTTTTTCAGACTTCCTACATGGAAGGCTGGAATT TACCTAAAAGGGTTGACTGACAGTTGTTTATTTACTTGATATCTGTAAGAGAAAAACAAGAATGTTGTTGGCTTTCAGTGAGCAGACGAAGGGCCAGAAA CTCCCAGAGAATGCCTCAGATCATGAAATGATTGAGATTGTCATGGATAGATACGAGAAGGAACTTGCACATCCTATTCAAAACCTTGTCAATGGAGAGC TGGCCAGGGCCTTGCTCATTCAGGTTCAAAAGCTCAAACTGGATACTGAGACGGCAATGCTTGAGCTGAACCAAATTCTACGGGCAAATGAAATCAATTT TGCTATTCTGGCGGCTTTGCCTGCCTTCTTTCTCTCTCTTTTACTCATGATGTTCGTACGTGCATGGTTCAAACAGGATACAAAAGCTGAGGGAAGAGGT AGAATTGCTCGGATTCAGAGGAGGCTACTTGTCGTAGAGGTTGAGAAAAGGGTTATGCAGTACCAAAATTACATTGAGCAAGGATTGGAGAAGGATGCAC AATGTATGTTTGGATTGATACTCTATAGCCTGGATCGCCTATATCATTCTGTGAAGAGACATGCAGAAGCTTCTGGAGAGTGGCAATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_146165; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_434845
| Blastp | Protein DGS1, mitochondrial from Arabidopsis with 70.11% of identity |
|---|---|
| Blastx | Protein DGS1, mitochondrial from Arabidopsis with 70.29% of identity |
| Eggnog | nuclear control of ATPase protein(ENOG4110107) |
| Kegg | Link to kegg annotations (AT5G12290) |
| CantataDB | Link to cantataDB annotations (CNT0000893) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460260.1) |
| Pfam | ATP synthase regulation protein NCA2 (PF08637.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |