Id Trinity | TRINITY_DN46653_c0_g3_i2 |
---|---|
Name Transcript | Ll_transcript_433617 |
Sequence | GGGGAAGTCTCCCTTGGCAAGGACTTAAAGCAGGAAATAAGAAACAGAAGTATGATAAAATCAGTGAAAAAAAGGTTTCTACCTCAATAGAGGCCTTGTG TCGAGGCTATCCGACTGAATTTGCATCATACTTCCATTACTGTCGATCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTTCGC GACCTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACTATCTTGAAGTATCAACAATCGCAGCTAGCTACTCCTCCGACACGTGGCA TTGGTCCTAATGCTGGAACTAGTTCTGGATTGCCTCCGGCTATGACTAACGCTGATAGACAGACAGGTAGTTTCTTCGAAAATATTTCTCTGTTTCTAGT TGACATTGAAATTTAGTTACTATAATTGACTATAAAGCAAACTCACCGACACGACATAGATGCAGAGACAAACCAAAATCTAAAAATTATAGGACATTGA CACATAAATTTAATGAAAAGATTCATGATTTATAATAGGTTTAAATATGCCCTTAGTCCATGTAAATAGGGATCTTTTGATTTTCATCCTTATAAAAAAC AAAGTCAGTCAAAGTCGCTCTAAACTCGTTTATTTTTATTTTAGTCCTCATTTTTAGTAGAGATGTGACAGGGATCAAATCCAAAACTTAAACACATTAT AGGGACCAATTCCAAAACATCAACACATTACAGGAACCAAATCCAAAATGTCAAACACATTTTGGGGACCAAACCCAAAACAAAAACATAGTACTAACTA ACAGCAGAGAGCCAAACACAAAAGTCAAAGTAAATGAGTTTACAGGGACTTTAAGCAAACAAAAAAATTCTAAAGGGACCAAAATTAAAATACTCATAAT TTACCAGGTGAAAAAAACTTCTTTAAGCCATTTTGATTTTATTCCTTGCTGTTAGCCATGGTTTGTTAAGTGCTAATATGACAGGAGCCAAATCCAAAAC TTAAATAAATGGACCAAATCCAAGATATTAACAAATTACACAGATCAAATCCAAAACATCAACACATTATAGAGACCAAACCTTAAATAAAAAAACCATG TGATGTACTGGGCCAACTAATAGTATGGAGTCAACTAAAAATAAATGAGTTTAAAGGGATCTTGGCCATTTTTTTTACAAGGATTTAAACCATAATATCC ATACTTTACATAGATTGAAAAATATTTTAACCTTTATAGTATTTATAATATGATATGATTCATAAGCTTCAACATTTACAACATCTTGATGCCAATATTT GCTACTTAGTAAGTTCCTCCCAGAAAACATGGAGCATAATTTCTATTGGCATTTTCCAAAAAAAAAAACATTCATAAACAAACTTCCTCTAAGTTCCTAA TAGAACAAGCCATGTACAAAGTACACGTACAGCCAAGAAAATTAACCAGCATGAGTATCTAAAGATTAACTTCATTTTGCTCTCCACCATCAACATGATG GTGGCGTGATGCCTCAGTCGCAGATGGAGGTAGATGGTTAGATTGGATAGGGTGGACTACCAGTGAAAAACATTGCGATCTGGCTAAGATAGGTGGTGGT AACTGAGTAATTGAGCTTCAGTATGGGATATTTGGGTATACACTGCTATATGCCCTTTTTAAATGGTAATTGATTTGTTTTTCATATTTAAATTGGCCAT GTTTTCTGGTGTCTGCATTTCTGAGCTGGGATGTTTTTCAATTGGACACGCGTGGACACATACATGTGTGTCATTCTTGTGTCTGTTTCTGACACAGACA GTACTGGGCACCAAATGGTCTCTTCTAGATAATTTGTTAGTGTGTGTTTATATTACTATGTTCAACTATAACCCATGCTTTATCTAGCTTGTTGTCATTT ATGTGATCAAACCTTTTGTCACATGTTTTCTTAATTCCAATTGAATTATTTTTTTAGCTATCTCATTGCCTTGCTCTTACTTTGTAATCATCAATTCATT ATTCCAACTACTTGTTAATGTAGCTTTTGTAATAACTCTTATTCTGCCATGGTTAAGTAGCATCTGGTTGGCTTGAGATTTTTGTTTTGTTTTTTCTTTT GGTTTATTTGTCTCACAGGAGGGGAAGAGGGTCGACCTCCTGGACTGGTGTCAGCGGAATCCTCACGTCGAAGAATGCCAGGGCCTGTTGTAAATTCTGC AAGTTTTTCAAAGCAGAAAAGTCCAATCATGAATGATTCTGCTGTTAACAAGGATGCTGCGGTGAGTTCTTCGGAGTGCTTGATTTCCTTGGGGTTCCAT TTAAAATAATCAGCTCATCGTATTCTTCTGTTTACTCACTGATTATGAATGTGTAATGGTTGATGTCAAAGTATGCAACTGACCCTAGTTTTACTCTTGC AAAAAAAATATTTGCATCGTCTATGATCATGCAGTTATCGAGTAACAATTTCATGGGCCAGTCAAGCGGATCAAGGCGATTTGCACTCTCTGGTAGTCGT GAGGCATTTGTTGGCAGTGAGTCAGATATTCGTACTCGTACAACTGAGGCTGGCTCCGGAGCAGCATACAAAATTTCAAGTGGGCAAAAAAGTTCACCAA TTGGATCTTCAGATCCCAAGAGAGCAGTGTCATCTGCAAGAAACACTTCCGATGGCAAGAACTATGAATCTGCCGTCAAGGGCATCGAGGGATTGCAGTT AGAGAATGATGAGAGGACCCATCACTGATCTCTCACCTTTTCTTTCATCTTGTAAATGTAAATTCGAGTTGCAATGTTTGTTTATCTTGCTAAGGTGAGC TATGGAGGGATCTCAGTTTCAACTCAGAAATCTGAGTTTGTATTGTTTACTCATTTGTGAAGCTGAAAGAAGTAGAGCTAAACCAGGGATTGTTCTCTCT GTATAGTTCTCTGTTCAGGACTAAATTGGCACTTATCTTATGACAGGAACTCATAGATTTTGTAACCTTGTACTATGAATTATTGCTGATTTACCATATG TCTACAGTGTCATGTGGACCAATATAGTTCAAAACTATCAAATATCTGCAAAAGAATGTAATTAGCCATTATTGTTAAACTCTTTGTTTGGATGAGATTG AAGTTTCAAGAATATAAGTCTCTGAGTTACTGTGCCATTTTGG BLAST |
Tissue | pods |
Gene name | LI_gene_146169; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433617
Blastp | - |
---|---|
Blastx | Casein kinase 1-like protein 1 from Arabidopsis with 83.61% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0002396) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437556.1) |
Pfam | - |
Rfam | - |
GO | - |