Ll_transcript_433133

• Id Trinity: TRINITY_DN46656_c8_g1_i1
• Name Transcript: Ll_transcript_433133
• Sequence: AAAGTATTTTCGGCCTGAAAGATAAAAAGAAACTTATAAGTCGGCCACAATAAATAACAAAGCTCATCGATTATTTTCTCGTTTTATTTTTGAATAAGAA AAATTTATTATTAACCATCTGTAATTCTGTATAATATAGAGAGTACATAACCAAATCGGTTTTACTTCTTCCCCGATCTTCTTGCGCCGCCGTATCACCA CCGTCGCAGTCTCCCCTCCGTCCAACCTCATAACCCCGATATCGCGTAACCGATTTAGGGTTTTGAGACTTCCACTCCATAATCAAGATGAAGAAAGCTG GAGATGAAGTTGTTGACTTAGACAAGACCACTGTTACAATGGAATCTGAGATTGGTAGTAGTGGTGGCGGACTCTACCTTCCTGGAAAGGATAGAATGGT GTATGTTCCTCCAGAAAGAAAATCTCGTTTAGGACTTGATGTCCTTGCCATTGCGAAACGGGCTGAGTCTCAACCTGATGGAGGGGGATTCAAGGTTCCA AAAGAAAGAACCACATCCATTGCAGCATCTGCTGAGGAGGATGAAGATAAGTCTGAGTCTTCTGCTGTTATTGATGAAGGCGAGCATGGCAGAGTTGATA GTAAACTTAGACATGGTAATAGGAGATATCGTGAGACCCCCAATGAAACACCAGAAAGTTCTTTGACTGTAGATCACCATGGTAGTACACATGGGACTCG TTCAACTGAGCATTTGGGTTCAAGTGTTGCTGGCTCGCCTTCTGGATATGACAGGAACGATCATAGGAGTGAGAGGAGACATTACAGGGATGATTCAAGA AGTGATAGCAGTAGAGTGCGGCATAGAAACAATTATGAAAGTAAGGAGCCTTATCCAGAAAGGGATTCACGTAGTAGATATGACCATGATTATGGTAGAA AGCGAAACAGATATGATGGTTCCAGGAGAACACCTGGCAGGTCTGACTGGGATGATGGCCGCTGGGAATGGGAAGATACTCCAAGAAGGGAAAGTGTCTC TAGTTCTAGACGTTACCAACCTTCACCATCCCCAATGTTTGTTGGTGCCTCACCAGATGCACGATTAGTTTCTCCATGGTCGGGGGGCCATACTCCCAAT TCATCCTTTGCTGCATCTTCTCCTTGGGATCATGTTTCTCCATCTCCTATTCCAATACGTGCTTCGGGACCTTCAGTTAAATCTTCCATTTCTAGAAATA ATAGGTCTCATCAGCTCACTTTTTCATCAGACACTTCAAACACACGCGAGGATGATGTGGCAGATAAGTTTGACTTGGGTGAAGAGCAGAAGTATGAGAT TACTGAAAGCATGCGTAAAGAAATGGAATACGATGCTGACCGAGCATGGTATGATCAAGAGGAAGGAAGCACAGTGTTTGATACAGATAAGTCATCAGCT TTTCTTGGAGACGAGGCTTCCTTTCAAAAAAGAGAGGCTGAGTTGGCCAAAAGACTGGTTAGAAGAGATGGGACTAAGATGTCCCTTGCTCAGAGCAAGA AATTGTCTCAGCTCACAGCTGATAATGCTCAGTGGGAGGATCGGCAACTGTTGAGATCAGGAGCTGTTAGAGGTACTGAGGTTCAGACTGAGTTTGATGA TGAGGAAGAACGCAAGGTTATTCTTCTTGTGCATGATACAAAGCCTCCTTTTCTTGATGGCAGAGTTGTTTTCACTAAGCAGGCAGAACCAATTATGCCA ATAAAAGATCCAACATCTGACATGGCTATAATTTCTCGCAAGGGATCTACTCTGGTCAGAGAAATACATGAGAAGCAAAGTTCGAATAAGTCTCGCCAAC GCTTTTGGGAGCTTGCTGGCTCAAATCTTGGTAATATATTGGGTGTTGAAAAAACAGCAGAACAGATTGATGCAGACACTGCTGTTGTGGGTGAAGATGG TGAAATTGATTTTAAGGAGGAAGCTAAGTTTTCACAGCATTTGAAAAAGGGAGAAGCCGTGAGTGACTTTGCTAAGTCAAAAAGCATTTCAGAGCAAAGG CAATATTTGCCCATTTTTTCTGTGCGAGAAGAGTTATTACAGGTTTGTTTTTCTTCGTTATATAGTATATACATGATAATTAAATACTTAATTAATGATA GGGTTGCTTTCTATCAAAACAACGAGTCTTTGGAATTCAGTCATCCAGGTTAAAGCATTAGTGATGTACTTCTTTTTCCTTCTTTCATCCCATTAGACAT TAGTTTGCATTTGCTCAATGTACTTGTGTAATGTACTTCTGCATTTGTACTTGCTTTGGAAGTACATGACTTTCACTTAAGTAGAAGTAAGACATAATTT GAAATGTAAGTTCCAAGAGTTGTGTTAATTCTAACTTGGAGGTGAAAAATGGAGATCATAATATAATAAGTCACAAGGTTTTAAGTGTCTTGTGTCAATA ATACAAATTGATGGAGAAAAAGAAGATGCAAACCATATGATTAAAGCGGGGTTGATGGAATGTTGAAGTGCTTTGAATATTATTGTACTTTGTGGTAAAA GTGTACTACTCAACCGCAAGGGAAAAATTTATTGTACGAAACTGTATGTTAGGCTGTTAGCGATAAACTGCCAAGAGAATGAACTGAAAGTAGCAGAGAC AAACATACTGAGTTGGATGAGTGGACACACTAGACAAGATAAGATTGTGAGTTAATGCATTAGAAAGATAATTCAGGTAGAATATGGTAGAATCTCTTCT TATGTGATTTGGGCATGTGTGAAGGAGACATAGAAGCCCCCATTAGGAGTGTAGATCAGATGGATAGTACTATTTTTAGAGGTACATAGAGACCACGAAA AACTAGGCGGAAATACTGAGTGGCTCAAATATCATTGGTTTGCATATGAACATCAATTATGATAGAACATTATGACACAATATGATCCATGTAGCCGACT CCACCTTATCAAAGCTTGACTGTTGTTTAGGTTGCTCTATTCTTTTGTCAACATGTTAATGTTTGAGTTTTTCTTATCGCCATCAGTATTGTTCTGAAAC ATGTAGATTTTGGCCCATATATGCTTATGGAACAATTTCTCTATTTCATGATATACCATGTGCAGGTGATTCGAGAAAATCAAGTGGTGGTAGTGGTTGG AGAAACTGGTTCTGGAAAGACAACACAATTGACACAGTATCTGCATGAGGATGGATACACTATAAATGGCATAGTAGGCTGCACCCAACCGAGGCGTGTG GCAGCTATGAGTGTTGCCAAGAGAGTTAGCGAGGAGATGGATACAGAGCTGGGCGATAAAGTTGGCTATGCTATACGTTTTGAGGATGTGACTGGGCCAA ATACCATTATAAAGTACATGACAGATGGAGTACTTCTACGTGAAACACTCAAAGACTCTGATCTAGACAAGTATCGGGTTATTGTTATGGATGAAGCCCA TGAAAGATCACTCAGTACAGATGTTCTTTTTGGAATATTAAAGAAGGTTGTGGCACAACGTCGCGATTTCAAGCTGATTGTTACATCAGCAACTCTTAAT GCACAGAAATTTTCGAACTTCTTTGGAAGTGTGCCTGTTTTTCATATTCCTGGAAGAACATTTCCTGTGAATATATTATGGAGTAAAACTCCAGTTGAAG ATTATGTTGAAGGTGCAGTGAAGCAGGCTATGACTATTCACATAACCAGTCCTCCAGGTGACATCCTTATCTTTATGACTGGCCAAGATGAGATTGAGGC AGCTTGCTATGCCCTTAAGGAAAGAATGGAACAGATGGAGTCGTCTTCAAAAAAAGAAGTCCCTAAACTCTCAATTCTTCCCATATACTCTCAGCTTCCT GCAGACTTGCAAGCAAAGATATTTGATAAAGCGGAAGAGGGAGAACGTAAGTGTATCGTTGCCACTAATATTGCTGAAACATCATTGACCGTTGATGGTA TCTACTATGTCATAGATACAGGCTATGGTAAAATGAAAGTATATAACCCCAGGATGGGCATGGATGCTCTCCAAGTCTTCCCTGTCAGTCGTGCTGCTGC TGACCAGCGTGCTGGTCGAGCTGGTAGAACTGGGCCTGGAACGTGCTATCGGTTGTATACGGAGAGTGCTTACTTAAACGAAATGTTGGCCAGTCCTGTT CCGGAGATTCAGAGAACTAACCTTGGCAATGTGGTCCTGTTGCTGAAATCTCTTAAAGTTGAAAATTTACTTGATTTTGATTTCATGGATCCTCCTCCCC AAGATAATATTCTCAATTCTATGTACCAGCTGTGGGTCTTGGGTGCCCTTAATAATGTTGGGGGTTTAACTGCTCTTGGATGGAAAATGGTCGAGTTTCC GCTGGACCCTCCACTTGCTAAGATGCTTCTGATGGGCGAACAGTTAGAGTGTCTTGAGGAGGTTTTGACAATTGTTTCCATGCTTTCAGTACCATCTGTT TTCTTTAGACCCAAGGACCGAGCAGAGGAGAGTGATGCTGCTCGTGAAAGATTTTTTGTGCCGGAATCTGACCATTTAACCTTATACAATGTTTATCAGC AATGGAAGCAGCATGATTACAGAGGTGATTGGTGCAATGATCATTATTTGCATGTTAAAGGTCTAAGGAAGGCTAGAGAGGTGAGATCCCAGCTGCTTGA TATTCTCAAGACTTTAAAGATACCCTTAACCTCCTGTTTTCCGGATACAGACATTGTCAGAAAAGCAATTTGTTCAGCATACTTCCACAACTCCGCAAGA TTAAAGGGTGTGGGGGAGTATGTTAACAGCCGGAACGGTATGCCGTGTCATCTTCATCCCAGTAGTGCTCTCTATGGTATGGGTTGCACTCCCGACTATG TGGTTTATCACGAGTTGGTCCTGACTTCGAAGGAGTACATGCAGTGTGCCACAGCAGTGGAGCCGCAATGGCTGGCCGAGTTGGGACCCATGTTTTTCTC TGTTAAGGAGTCTGATACATCATTGCTGGAGCATAAGAAGAGACAGAAACAAGAGAAAACAGCAATGGAAGAAGAGATGGAGAATTTGAAGAAGGTGCAA GCAGAGGCTGAGAAAGAAATGAAACAGAAACACAAGGAAAAGATGGCTAAGCAGCAACAGCAAATCTCCATGCCGGGTTTGCGAAAGGGTTCTTCCACTT TTTTGAGACCAAAGAAGTTCGGTTTGTAATAACACTATCAAGTATTTACTTGTAGTAGCCTCATACATTCTCATTGTAATAACAAAGTTAGAATTTGTAC CCATTAGGTTACTGATGGTCTCATATGAATTCTAGGTAATGCACATTCATTATTTAGTTTGCTTTGCAACCTTGAGCACTGTATCTGTTGATATATTGTT TTTACTCAAATCAAACAACTTCAATTTGTTAATTTACATTAACAAGAAATGACAGAAACCGTGTTTTGAAA
• Tissue: pods
• Gene name: LI_gene_146210;
• Additional information: details;

Expression of Ll_transcript_433133

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.1
• PS3: 0.3
• PW1: 0.2
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_433133

• Blastp: Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 from Arabidopsis with 59.73% of identity
• Blastx: Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 from Arabidopsis with 86.54% of identity
• Eggnog: helicase(COG1643)
• Kegg: Link to kegg annotations (AT5G13010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457682.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;