Ll_transcript_433134

• Id Trinity: TRINITY_DN46656_c8_g1_i2
• Name Transcript: Ll_transcript_433134
• Sequence: AAAGTATTTTCGGCCTGAAAGATAAAAAGAAACTTATAAGTCGGCCACAATAAATAACAAAGCTCATCGATTATTTTCTCGTTTTATTTTTGAATAAGAA AAATTTATTATTAACCATCTGTAATTCTGTATAATATAGAGAGTACATAACCAAATCGGTTTTACTTCTTCCCCGATCTTCTTGCGCCGCCGTATCACCA CCGTCGCAGTCTCCCCTCCGTCCAACCTCATAACCCCGATATCGCGTAACCGATTTAGGGTTTTGAGACTTCCACTCCATAATCAAGATGAAGAAAGCTG GAGATGAAGTTGTTGACTTAGACAAGACCACTGTTACAATGGAATCTGAGATTGGTAGTAGTGGTGGCGGACTCTACCTTCCTGGAAAGGATAGAATGGT GTATGTTCCTCCAGAAAGAAAATCTCGTTTAGGACTTGATGTCCTTGCCATTGCGAAACGGGCTGAGTCTCAACCTGATGGAGGGGGATTCAAGGTTCCA AAAGAAAGAACCACATCCATTGCAGCATCTGCTGAGGAGGATGAAGATAAGTCTGAGTCTTCTGCTGTTATTGATGAAGGCGAGCATGGCAGAGTTGATA GTAAACTTAGACATGGTAATAGGAGATATCGTGAGACCCCCAATGAAACACCAGAAAGTTCTTTGACTGTAGATCACCATGGTAGTACACATGGGACTCG TTCAACTGAGCATTTGGGTTCAAGTGTTGCTGGCTCGCCTTCTGGATATGACAGGAACGATCATAGGAGTGAGAGGAGACATTACAGGGATGATTCAAGA AGTGATAGCAGTAGAGTGCGGCATAGAAACAATTATGAAAGTAAGGAGCCTTATCCAGAAAGGGATTCACGTAGTAGATATGACCATGATTATGGTAGAA AGCGAAACAGATATGATGGTTCCAGGAGAACACCTGGCAGGTCTGACTGGGATGATGGCCGCTGGGAATGGGAAGATACTCCAAGAAGGGAAAGTGTCTC TAGTTCTAGACGTTACCAACCTTCACCATCCCCAATGTTTGTTGGTGCCTCACCAGATGCACGATTAGTTTCTCCATGGTCGGGGGGCCATACTCCCAAT TCATCCTTTGCTGCATCTTCTCCTTGGGATCATGTTTCTCCATCTCCTATTCCAATACGTGCTTCGGGACCTTCAGTTAAATCTTCCATTTCTAGAAATA ATAGGTCTCATCAGCTCACTTTTTCATCAGACACTTCAAACACACGCGAGGATGATGTGGCAGATAAGTTTGACTTGGGTGAAGAGCAGAAGTATGAGAT TACTGAAAGCATGCGTAAAGAAATGGAATACGATGCTGACCGAGCATGGTATGATCAAGAGGAAGGAAGCACAGTGTTTGATACAGATAAGTCATCAGCT TTTCTTGGAGACGAGGCTTCCTTTCAAAAAAGAGAGGCTGAGTTGGCCAAAAGACTGGTTAGAAGAGATGGGACTAAGATGTCCCTTGCTCAGAGCAAGA AATTGTCTCAGCTCACAGCTGATAATGCTCAGTGGGAGGATCGGCAACTGTTGAGATCAGGAGCTGTTAGAGGTACTGAGGTTCAGACTGAGTTTGATGA TGAGGAAGAACGCAAGGTTATTCTTCTTGTGCATGATACAAAGCCTCCTTTTCTTGATGGCAGAGTTGTTTTCACTAAGCAGGCAGAACCAATTATGCCA ATAAAAGATCCAACATCTGACATGGCTATAATTTCTCGCAAGGGATCTACTCTGGTCAGAGAAATACATGAGAAGCAAAGTTCGAATAAGTCTCGCCAAC GCTTTTGGGAGCTTGCTGGCTCAAATCTTGGTAATATATTGGGTGTTGAAAAAACAGCAGAACAGATTGATGCAGACACTGCTGTTGTGGGTGAAGATGG TGAAATTGATTTTAAGGAGGAAGCTAAGTTTTCACAGCATTTGAAAAAGGGAGAAGCCGTGAGTGACTTTGCTAAGTCAAAAAGCATTTCAGAGCAAAGG CAATATTTGCCCATTTTTTCTGTGCGAGAAGAGTTATTACAGGTGATTCGAGAAAATCAAGTGGTGGTAGTGGTTGGAGAAACTGGTTCTGGAAAGACAA CACAATTGACACAGTATCTGCATGAGGATGGATACACTATAAATGGCATAGTAGGCTGCACCCAACCGAGGCGTGTGGCAGCTATGAGTGTTGCCAAGAG AGTTAGCGAGGAGATGGATACAGAGCTGGGCGATAAAGTTGGCTATGCTATACGTTTTGAGGATGTGACTGGGCCAAATACCATTATAAAGTACATGACA GATGGAGTACTTCTACGTGAAACACTCAAAGACTCTGATCTAGACAAGTATCGGGTTATTGTTATGGATGAAGCCCATGAAAGATCACTCAGTACAGATG TTCTTTTTGGAATATTAAAGAAGGTTGTGGCACAACGTCGCGATTTCAAGCTGATTGTTACATCAGCAACTCTTAATGCACAGAAATTTTCGAACTTCTT TGGAAGTGTGCCTGTTTTTCATATTCCTGGAAGAACATTTCCTGTGAATATATTATGGAGTAAAACTCCAGTTGAAGATTATGTTGAAGGTGCAGTGAAG CAGGCTATGACTATTCACATAACCAGTCCTCCAGGTGACATCCTTATCTTTATGACTGGCCAAGATGAGATTGAGGCAGCTTGCTATGCCCTTAAGGAAA GAATGGAACAGATGGAGTCGTCTTCAAAAAAAGAAGTCCCTAAACTCTCAATTCTTCCCATATACTCTCAGCTTCCTGCAGACTTGCAAGCAAAGATATT TGATAAAGCGGAAGAGGGAGAACGTAAGTGTATCGTTGCCACTAATATTGCTGAAACATCATTGACCGTTGATGGTATCTACTATGTCATAGATACAGGC TATGGTAAAATGAAAGTATATAACCCCAGGATGGGCATGGATGCTCTCCAAGTCTTCCCTGTCAGTCGTGCTGCTGCTGACCAGCGTGCTGGTCGAGCTG GTAGAACTGGGCCTGGAACGTGCTATCGGTTGTATACGGAGAGTGCTTACTTAAACGAAATGTTGGCCAGTCCTGTTCCGGAGATTCAGAGAACTAACCT TGGCAATGTGGTCCTGTTGCTGAAATCTCTTAAAGTTGAAAATTTACTTGATTTTGATTTCATGGATCCTCCTCCCCAAGATAATATTCTCAATTCTATG TACCAGCTGTGGGTCTTGGGTGCCCTTAATAATGTTGGGGGTTTAACTGCTCTTGGATGGAAAATGGTCGAGTTTCCGCTGGACCCTCCACTTGCTAAGA TGCTTCTGATGGGCGAACAGTTAGAGTGTCTTGAGGAGGTTTTGACAATTGTTTCCATGCTTTCAGTACCATCTGTTTTCTTTAGACCCAAGGACCGAGC AGAGGAGAGTGATGCTGCTCGTGAAAGATTTTTTGTGCCGGAATCTGACCATTTAACCTTATACAATGTTTATCAGCAATGGAAGCAGCATGATTACAGA GGTGATTGGTGCAATGATCATTATTTGCATGTTAAAGGTCTAAGGAAGGCTAGAGAGGTGAGATCCCAGCTGCTTGATATTCTCAAGACTTTAAAGATAC CCTTAACCTCCTGTTTTCCGGATACAGACATTGTCAGAAAAGCAATTTGTTCAGCATACTTCCACAACTCCGCAAGATTAAAGGGTGTGGGGGAGTATGT TAACAGCCGGAACGGTATGCCGTGTCATCTTCATCCCAGTAGTGCTCTCTATGGTATGGGTTGCACTCCCGACTATGTGGTTTATCACGAGTTGGTCCTG ACTTCGAAGGAGTACATGCAGTGTGCCACAGCAGTGGAGCCGCAATGGCTGGCCGAGTTGGGACCCATGTTTTTCTCTGTTAAGGAGTCTGATACATCAT TGCTGGAGCATAAGAAGAGACAGAAACAAGAGAAAACAGCAATGGAAGAAGAGATGGAGAATTTGAAGAAGGTGCAAGCAGAGGCTGAGAAAGAAATGAA ACAGAAACACAAGGAAAAGATGGCTAAGCAGCAACAGCAAATCTCCATGCCGGGTTTGCGAAAGGGTTCTTCCACTTTTTTGAGACCAAAGAAGTTCGGT TTGTAATAACACTATCAAGTATTTACTTGTAGTAGCCTCATACATTCTCATTGTAATAACAAAGTTAGAATTTGTACCCATTAGGTTACTGATGGTCTCA TATGAATTCTAGGTAATGCACATTCATTATTTAGTTTGCTTTGCAACCTTGAGCACTGTATCTGTTGATATATTGTTTTTACTCAAATCAAACAACTTCA ATTTGTTAATTTACATTAACAAGAAATGACAGAAACCGTGTTTTGAAA
• Tissue: pods
• Gene name: LI_gene_146210;
• Additional information: details;

Expression of Ll_transcript_433134

FPKM

• PAB: 5.9
• PNAB: 12.3
• PS1: 19.8
• PS2: 12.2
• PS3: 16.6
• PW1: 14.4
• PW2: 15
• PW3: 14.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_433134

• Blastp: Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 from Arabidopsis with 75% of identity
• Blastx: Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 from Arabidopsis with 73.74% of identity
• Eggnog: helicase(COG1643)
• Kegg: Link to kegg annotations (AT5G13010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457682.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;