Id Trinity | TRINITY_DN46661_c7_g1_i7 |
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Name Transcript | Ll_transcript_433349 |
Sequence | GTTCAGAAATATTGAACATGATGGAGTGGCAGAAGAAGGAGATGACGATGATGAATGGGAATGAAATGATGTATGTGAAGGGGTTAGGGTGGGAAATATG TATTGTGACCCATTGATGAACTCCATTGGTCACAAACTAACTTCCAGACAAAGATGGACTCCTACACCGATGCATCTTCAGGTTCTCGAGCGTGTATTTG AGCAGGGGATCGGGACTCCTAGTAAGGAGAAGATTAAGGAAATTACTGCGGATCTTATCCAGCATGGTCAAATTTCCGAGACCAATGTTTATAATTGGTT CCAAAACAGGCGAGCTCGATCGAAAAGAAAGCAGCAGCAACAGAATTTAGGGTCTAGTAATGCTGAATCTGAGGTGGATACTGAGGTTGATTCAAAGGAA AAGAAGACTAAAGCTAAGGAGTTTCAGTCTCAGCATAGAGTAACTTCTGGGGTTTTCGAGAACCCTCAAGTAAGCTATGATTTGCAGTACTTGAATTCAG AATCCAACGAGCCTGATTCCATGTTTCCGCCAGAAGGCAATCTAAGTCCCTCAAGAAATTTTAGCGACGTGCCTGTTTTTGATGGGATGCTGTCAAACTC AAGTATGTAACTTCTGATTTCTTTCTTTACTTATCTCTTTATCGATCAATCACTTTAGTTGTAAAGTAAAGTTAGTATCCTATAATATTATTTATAGCTT ATACGAGATGATAATATCGCATCTCAGTGACCAAGAGGTAAAATTGTTGTTTAGTCACCGAGAAATCAATTCTATGTGCAGAATAATGTACCAGGACAGA TAGTTAATGTTTATTTCACGATCAACTTGGGATGAAAAGTTTTCCAAGCTAATGCCGTTTTTATGTTTTGTTAGGAGAGGAGGTGATAGAGTGTTATATA TGTTATTTTTATTGATACTTGTAGGAATTGTTACTAATCTTTAGTAGGTAATTAGGTGATTATAAAGCAATTACCGTTTACCGATAATTAGTGGTTCGGT ATTCTCTATTGTTGCTGATACCATTACCTGCTATATATGTCAGAATTCGAACATATTTGAGAAATGGATATATCACTTTATGTCTCTTTTCTTATGAGTA TCCAACTGTTATTTATAATCATGTGGAGGAAACTGGAATTGAATTATCCGATTTGAAAATACTCAAAAAGAGGCAATAGCCAGGTTGTAAAATTAACTTT ATGGTCCATATAGTATAACAGAGGAATATTTTCCTAGCATAGATCCGAAAATATCAATACTTTACGGGGATTCACTTAACGATTTCCCCCTCCAACTCGG CTATTATTTTGTACAAGCTAGCTTAGCTGAGTAAAATTTGCAGTTGAAGTTGGTACTTACTTTCTAGGTACTTAGTAGTGATGCAGAATGAAATTCTTTG GTAAACCCGGATGGTCGAATTCTCCCCTTCATTTTGTGTTAAGAAATATGTAATATCGATGTATCGTTCCTCGGCAAGTTACTTGCAGAAATTACTTTGG CCAATGCATTTATCATTATAATGATATGGTTTCATTTAGATCCTCCAATTCATAACACACATGATTATGTAAATTAAGATCATGTTCAACACTTGCAAAG TTGCGCATCTCCAGAAACCGGAACGTTTCCATGCGTGCGTGTATGTTTCTCCGGCATCATACATTTTGATGAATTATATCCGCCTTCGTGTTTTCAATTT ATTTAGGACATGGAGTCTTGTAATAACAACCTCTCTTTATTATAGAAATAGATAATCAAGATTGTTGTTACATCCCCGGATAATGTTTTTTGCAGGGAGT GACTATCTTGCTGGAAAATTTGAAGAACCTGAGAGCTTCAACTTATACCAGCCAACGGGCGACTACGACATGGCAGGTTGACATTTGTCGAAACTTCCGA CGACTGTGATTAGTTGTAAAGAGCAGGGAGTGTGGTTTTTTCGGCTTTTGTGTTAATGAAAAAGCAAATTGAACCAATCTACACGTCGGAACTTATAATA TTTACATATATAGTGATCTTTTATTATAGGAGCTGAACATTTTACTTAATGGCATATAAATGCGATTTGGTATTACAAATTTGCATCTCTTACCTTCGGG TTGGTTTTTTGATATTGTGTTAGAAGAGATTCATAAGATTGTTATTTTTGGTAGTTTTCTTCTGCAAATTTGATTGGAAAAAGTAGGGTTGGGATCGAGC TGAACCAAGTCGAATCAAAGCTCAGCTCAAATTCAGTTTGGTTAAAGTTTGCGAAGAGTTAAACTTAGTTCAAATTGATTTATTTGAAAAAATCAAATAA TTAATTCATTTTTAAAAATACTACAAAAGGTTATATACATATATATAAATATAACCTTGTTTTTATATATATATGTAATAACAATAAATATAAAAAAATA TTGCAGGGATCATGGTATAATATCTATAAACATAAAAAAAATAGTTTATATATATATATATGTGTGTGTGTGTATATATTGAGCTACCTCACGAATCTAA CGAGTCGAACTATATCTAGCTCAAGTTTGGCTCGTTTATTTAATGAACTCAATTTTCAGCTCTAATTTAGCTCATTTGGTTCATGAACCAAATTTATTGA GCTAAATAACGAGTCGAGTTTCGAACGAATACCGAGTTGGTTCGGTTCATTGCCAACCCTAGGAATAAGCTTGCATACAGCTTACCCTCCCCAAGACAGC AGGATCCCATAATGGTGGAAGCCTCGCGTATGGTTCCAATCTCTTGTTCAGCTGATAATTTTATTATATAAAATATTACAATGGATCTACAATTACTTGT GATTGCTTCACTTCAGCAGCTCCTGCTTTGATATTTCTTATCTATATTGCTTACCTGCCATCTAAAACTTCTGTGCTCGACAGGAAGCTTATATGCATAT GCGATTTCCTGAAGTTGCATCAATTTTTTTATCTTTTTCAGTGGAAATCAAAATTCCTGGCTCCCTTGACATTCTAATGCGTACTTGTGTGGTTCCTGGA TAAATGCTGTCATCTTTTATAGTGCTCTTGTTATCTCATCACATAGGGCATCCTTAAGATACTGGAGCTCTTGAAAGATTGGCAAGATCGTGGGACTGGT TAAATGTATGTGTGGTTCTAAAACTCTGGAGTCGCGATTTTCAACAGCGTAAAGCCACTGCCCGACAAGTCCTATTACAGTAACCTGGAAAGACCACATG GCTCCAACAAAAATATTGGATGTCACTCAACTTGTTTGATGGCTGTCTTGATGAGGTTGTTGTGAAATCATGGC BLAST |
Tissue | pods |
Gene name | LI_gene_146242; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_433349
Blastp | WUSCHEL-related homeobox 13 from Arabidopsis with 46.37% of identity |
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Blastx | WUSCHEL-related homeobox 8 from Oryza sativa with 75.68% of identity |
Eggnog | wuschel-related homeobox(ENOG4111P6E) |
Kegg | Link to kegg annotations (AT4G35550) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456714.1) |
Pfam | Homeobox domain (PF00046.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |