Id Trinity | TRINITY_DN46670_c2_g1_i2 |
---|---|
Name Transcript | Ll_transcript_434426 |
Sequence | GCTTATAAGAGAAAGGGCACAAGACTCTCTCCACAAGAGCCTTTGAAATTGTTTAGTCTTTCTGAGCAGCAATGGGTAGTTCTAAGAAGCTGATTGAGGT TCTAACAGATGAGCAAAGTCCTCATAAATGGTGTGTTTCATTGGGAGAAGAGGTTTTCAAAAGATTCTTCAGCCAGGTTAATCCAACAGTGCATAAGGTC TTTGGTGATGGATCACTTTTCAGTCCAATGTTGTTTGGGAAGTTCTTTGATCCTTCAGATGCATTTCCTCTATGGGAGTTTGAGTCAGATATCTTGTTAT CTCATTTAAGGAGCACTAACCAAAGCACTGTGGATTGGTGTCAGACAGATGAAGGGTACATATTAAAGGCAGAAATACCAGGTAACAAAGATAGTTTTTC ATTTTCATGTGTCAACATTCTTGAACTCTTCTTTATGAACCGAGTAAGAGTTAAAAAGATAGTTACTTGGTTCTGCTTAGTATGGGTCTATAAGTAGTAG AAGGTATGTTACCTTGGAAAATATTGGTATGCTAGGAGTATATTCGATAGAGTTTCTATTTCTCTATGCACAATCGTTTCTAGTGCTACTTCTTGTAGGT TTGAACCAACTTTTGTTTCACCGTACGAGAACTTGATAAAATTATTTCTTGTTTGTTATAACTCATTCATGTAAGTGAGTGTATATTACCAATTATTCTT CTTCTTTTTTTCCTTAAATTATAGGTGAAAATCTAGTTCGTTTCTTAAAGGGAACTGATTCGCAAAAAAAACACAAATTATTAGTAAGAAAGAAATTGTG AAACCAAGAAATTGCCTCATCATTTTTAAGACTTCCAAGAAAAAAGGATGTCAACACTAGAGGGGCTATTTAATAAACTTACATACATTATCATTTAAAA CAAAGGGAGGCTTGCATCAAAACTTTCTTTACAAGGTTGTGGTACAGTAACAACAAGTGACCTATGATTTAGTGGTTCCCTTTCATCAAGAATAATGTTT GGTGCACATCATAACTAAGCACATCACCTCACATCTTGTGCATGGGCCAAATAGTGAAAATTGTGCATATGTGAGATGATTTGTATACATATCAGAATAG AATTGGACAAAAAATGAGTTTTGTTATGTGTTTGATCAGTTGGTGCTTTCTGTAAAAAGAACTGACAAGGCAAAAGATTGAAAAGTAGAGCATGTTGGCT CCATTGTGTTTGGAAGTAAGTTCCAACCTTAGATATATGTTGGGTTACTTCTCTTATTGCTAATTGATCTTGAAATGAAACTTTGATATTGTATCTGTCC CCAAACCCAACTTTTTTCCATATGTCATGTACCGAAAGATGTCATTTAATTATGGGTGAAAGGTAACACTTCCTCTAGTCCATCCGGCTTCTGTGGATGG GGTGTGGAGGGAACTAAGTCTCACACTGAATGTCTCATTATTCCAATTATGTACTAAATACAACCTAAGCCCTTTAGTATTACTGTTTAGTCAATTAGGT AAACAATTACTTTTGTGGAGAGATCAGTTTAATTCAAGAATAAGTTTAAAAGACTTACTCCTCATCGTAGCCATCAATTCTAGATAAATCCAATGAATTG ATGGCTAAGGTGAATAATAAGTCTAAAAAAACTTACTCTTGTAGTAAATTGATCCTCACCCATTATTTTTTAGTGTATGAGTGTTTAACTAGTCAAAACA TGTGATAAAAGTGGTTTGCGAAAACAGGAACTGGTAAAAACAACATTGAAGTCCATGTTGATAAAGGGAAGAAGGTTGTGGAAATTAGTGGACAGTGGAA GCAGCAAAAGGACTCAAAGGAAAATGTGTGGAGATGTGGCCAATGGTGGGAATATGGATATGTAAGAAGGTTGTGGAAATTAGTGGACAGTGGAAGCAGC AAAAGGACTCAAAGGAAAATGTGTGGAGATGTGGCCAATGGTGGGAATATGGATATGTAAGAAGACTTGAGATGCATGAGGATGCAGATTGGAAGCATAT ACAAGCACACATATATAATGACATATTTTTAGAAATACAAATACCAAAGTGTAAAAAGGGTTGTGATGTTGCTTGAAGAAATGCAGACTCACAGTGGAAG TTTAAGATAATAACAGGTAGTTCTACTAGAGTTTGTTACAATTTTGTAGCAACTTTTATGCAAATTGATACTTTGACTTTAAAGAAACTTGTAACTATCA GTAAGCATGAGTGGACCTTCTGATGCTCTATAAAATATATATACAAAAAAGGGAATGAAAAAGAAATTGGATTGAACCGATAGTGTAAATGTTTTTTACA CTATCATTACATCTTCATCATTCATATGTTATATTGCCGAGTACTACAAATCAATTATTGATGATATGCAG BLAST |
Tissue | pods |
Gene name | LI_gene_146301; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_434426
Blastp | 21.7 kDa class VI heat shock protein from Arabidopsis with 59.38% of identity |
---|---|
Blastx | 21.7 kDa class VI heat shock protein from Arabidopsis with 59.38% of identity |
Eggnog | kDa class VI heat shock(ENOG410YHRU) |
Kegg | Link to kegg annotations (AT5G54660) |
CantataDB | Link to cantataDB annotations (CNT0000798) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457701.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |