Ll_transcript_433688

• Id Trinity: TRINITY_DN46672_c0_g1_i9
• Name Transcript: Ll_transcript_433688
• Sequence: AATGAAGTGATGATGAAACCTTTTTCTCTCGTTTTTAAAATTACAAAGCAAAAACATAAAAGGCATTTAGATTTTTCTGTACTATACAGTATAATATTCC ATTCCAATTTCATTGAATCAAAAAGTCAAAGAAAAAGGCACAATATTTATGAATTTGTGCTAATTAGGGTCTGCAGGACTATTGCATTCGTTTTCTTCTT CTGGAATTTAAGGATATTGTTTTGAGCTGTGTTTAGTTGAAGTTGGCTGCTTTTTGAAATAGGGTGCTGATCATGGTTATTGATGGGTAGTAGAAGTAGA AAAGTGAACTTTAACAGTGAGGAAGATAACAAGTTTGTGAAAGGGATGCCAAGTTATGTTCCTTCAATGCCTTCTTCTAATTCCATGGGCATAGAAGGAA CTACTGTTCATCCTTCTCAAATGTCTGAATATGGAAACCTTGAGCAATCTATTGGATTTCGTTTGGAGGATGCCATCAATCTGAGCAGAAATCCGGTGTT CAATCTAATGAAGTCGAATAGCCGAGGTCTAGGTGCTGATGTCCAGTTTGGTGCTTTGAGTAAGTCAGTTGCAGCCTCAGATGTTAACCTCTTTGCCACA ATGGCTGGGTCTCAGACATTGCCATTGCAAAAAGACCTGCCACCAAATTCGGCATACACATCAGCTGGTCATCATGAGAACTGGGGAGAGTCCAGCATGG CAGATGCAAGCCCTATGACCGATTCTTCAACAGATGATACTGATGATAAAAATCAAAGGGTGATTATTTTATATTCTTAAATCTATTCTGCTTCTACTGC CCTTTGTAGACACTGCCTGTCGCTCCTACCGTTTGAATGGTCCGGTGAAGTTTTCGGATTGCGGTGACGTGGGCAGTTCACTGCGGGCGATGCTGTTTTT ATGACTATTTAGTTGACCTCACCTACTAGGATTAAGCATTGGTTGTTATTGTAAATCTATTCTGCTGCTTAAAACCTTTATATGACTCCTTCAATGTTAT GTGTGACATTAGAGATAATATGTCCTTTTAGTGGTTCAATTTTATGAAGCAGATAAACAAATGCATACTGTTATTATGAAATATGGTGCATTATTGTCGT TTTGCAGCCTGAAAGGGGTCAATTAGCTGTTGCAACTGCTGATTCCAGTGATAGACCCAAAGATAAATCAAACCAAAAGGTTTTATGAATTTATTATGTT CATACAATGTATGCTTTTGTCACTATGAATTAATTTTATATTCATTCAGACATTAAGACGGCTAGCTCAAAATCGGGAGGCTGCCAGAAAAAGCAGACTG AAGAAAAAGGTATTTCATTTTGTTTCCTTTTAATCGTAAAAGTCATTGTAAAATTACTTGTTCTATAAGTTTAACCAAAAAATTGGCTAGTTGCTGGATT CAACACTGTGACATTGTTGATTTTCACATATATGGTAATGCCACGAATTTTCCATATTTTACTTTATTACCGGCCTTTAATGTCTTATTGTTTCTAGTCC TTCCTATTACATATAAAACCATTTATAAGAAATAGTTTAATATTTTGAAAGAGTTGGTGTTGACATGCTATTAGAGCCTCTATGACCAACTTTGTGAGGA TCCTCACGTCTGACATTTTTCTAGTTAAAAGTTGATGTTCAGCACAAGTTAGGGCAGGCTTTGCCATTATCCACGCTTCAAGCTCAAAAGGCTCGTGTTA GGGGATATGTTAAATATAAAAGCCATTCATAAGGCTCAAGGAACAACTTAAGTTTTTCGGAAAATGGTGATTGACACTTTCTATATTCATCCAGGCATAT GTTCAACAATTAGAGAGTAGTAGACTGAAACTGACCCAACTTGAGCAAGAGCTCCAGCAAGCCCGCCAGCAGGGCACATTTATTTCAAGCACGGGATATC AGGACCATTCATTGAGTGGAAATGG
• Tissue: pods
• Gene name: LI_gene_146317;
• Additional information: details;

Expression of Ll_transcript_433688

FPKM

• PAB: 0.6
• PNAB: 0.1
• PS1: 0
• PS2: 0.7
• PS3: 0.3
• PW1: 0
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_433688

• Blastp: TGACG-sequence-specific DNA-binding protein TGA-2.1 from Nicotiana with 43.26% of identity
• Blastx: TGACG-sequence-specific DNA-binding protein TGA-2.1 from Nicotiana with 40.98% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (107782457)
• CantataDB: Link to cantataDB annotations (CNT0000777)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429721.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;