Ll_transcript_434581

• Id Trinity: TRINITY_DN46678_c1_g6_i4
• Name Transcript: Ll_transcript_434581
• Sequence: AAAGAATAAGAAAAATTGTATGTATAGGTTTCGAAACCAAACTCGAAAAAGGTCAAACAGTTGTTTGTTATCACACACTAATCTCTCTTCTCACTCTCAT CTCATATCCAATTTACTCACACAACATCAAAGTTTCACACAAGAATGAATCCAATGTCTTGGGCTACCCCAGATGATGTTTTACTCTCTACTTCGCTCGC CACATACCTTGATAAAAAAATTATTGTCCTGTTGCGAGATGGTCGAAAACTTTTGGGGTTATTACGCTCGTTTGATCAATTTGCTAACGTAGTTCTTGAA GGTGCATGTGAACGAGTAATTGTTGGTGATCTTTATTGTGATGTCCCTTTAGGCCTATATGTAATTCGTGGGGAAAATGTTGTCTTAATTGGAGAGCTGG ACTTGGGTAAGGAGGAACTTCCGCCACATATGGCTTGTGTGTCAGAGGCTGAGATAAGAAAGGCTCAAAAAGCAGACAGAGAATCCAGTGATCTAAAGGG CACCATGAGGAAAAGGATGGAGTTCCTTGATTTTGATTAAAACCTGATGTCGTCTTAGTTCGGAAGCTGGCCCCATCTGCAAATATTAATGCAACTGTGA CTAACGGTTCGAAGAAAGTGGAAGAATAAGTATGGAAGATCATTTGTCTCTGGAAACTAGCAAGATTGGAAATAGATTATTTAAGAGCTCAAATCTATTT GTAGCACAGGTCAAGAAAGGAAATTAGCATTTTGTCTTTTCTAGAGTGCAACTTACACTTATCAATGCCCTTCTGTTGCATGTGGATTTTTACTGATGCA TATAGGGGCATTTTATTTAGCTCTTAAAACTCTAGTTTGCTTTTAGAAAATCTGATATAGTGAAGATAATTTGTTTGGCTATTTATTCTCTCACAATGCC TTTTCAGAATATTGTAGTTTTCAGTTTGTGTTTTGCTACATAGAGAAACCATTCAATCTTAACTTAAA
• Tissue: pods
• Gene name: LI_gene_146362;
• Additional information: details;

Expression of Ll_transcript_434581

FPKM

• PAB: 15.1
• PNAB: 21.1
• PS1: 23.9
• PS2: 11.8
• PS3: 21.9
• PW1: 15.3
• PW2: 9.8
• PW3: 9.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_434581

• Blastp: Sm-like protein LSM1B from Arabidopsis with 78.91% of identity
• Blastx: Sm-like protein LSM1B from Arabidopsis with 78.91% of identity
• Eggnog: LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)(ENOG411224Q)
• Kegg: Link to kegg annotations (AT3G14080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415981.1)
• Pfam: LSM domain (PF01423.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;