Ll_transcript_434495

• Id Trinity: TRINITY_DN46680_c2_g4_i8
• Name Transcript: Ll_transcript_434495
• Sequence: CTCATTTTAATTTTTTATTAGAAAAAAATACTTTCATTCTATTATCTACCATAGTTTTTAATTATCATTCACTCTTAAACAAAAGAATAAAAGTAATATA AACAAGTAGTAGATGATATATTATCTATATATAAATGCATGAATTAATAAATATTACAATCTGTTTATTATATTATTTTTCCTTGTCTACCAATAAAATT TGTCTCTCACTAAGTGCTTTTATTTCATATTTGAAATTGAATTTGACACACACTTGCCAAATGCAAAAACAAAACATGGCCACTTACATTACTCTCTCTC AATTTTCAGATTCTTCATTCAACAAAGCAAAAGAAGAAGACAAAAACCTCAAAAGGGCTTAAAAATTGGATCTGATTCTTCAAATTCTCACTTAATCTCC TGAATCAGTGCACTGAATCATTCTATCTACAACAACAGAAAATCGATTAAGGAAAAATTCACAACTTTTTTTCTGAAATCGGAATGGGAAAATCAACAAG CACAAGTAATAGTAGAGAATGGACTCAGATCTACGCAATTTACGGAATGGATCAATGGCAAACCCTAATTTTCCTCTTAACACAAGCGATTCTCTTCTCA GTGTTCTCAATTCTCTACCTTCTCTACTTCACCGTAATCTGCATCTTTTTCGAGCGCTTCCTCGCCTCCGGCACCGCCAGATTCGCCGCCGGGTTTATTG CCGCCGTCATAGTACTTTCAGCAGTTTGTTTATACTTCGCCGCCGCGAACTTCTTCTACTCCGCCGTTCCACTCCACTATGATATGGCCAATCGCATCGT CTCTGCCGTCTCCGACTGGTCCTCCGTCAAGCTCGCCCTCGACCTCGGCTGCTGCGGCCGCGGCATCCTCCTCAACGCCGTCGCGACGCAGCTGAAGAAA GAAGGCTCTTCCGGTCGCGTCGTCGGGTTGGACCGGTCGAAGCAAACCACGCTCTCCACTCTCCGATCCGCCGTCACGGAAGGCGTCGGGGAATATGTCA CGTGCCGGGAGGGTGACGCGAGGAGGCTGCCGTTCCCGGACAATTACTTTGACGTGGTGGTTTCGGGTGTTTTTGTGCACACCGTTGGGGTTGGACGGCG GAGCGCGGCAGAGGCAGCGGCGGAGAGGATGAGGGCGGTGGGGGAGGTAGTTAGGGTAATGAAACCTGGTGGGGTAGGGGTTGTGTGGGACCTACTGCAC GTGCCGGAATATGTTGTAAGATTGAAAGAATTGAAGATGGAAGATATATCACTTTCGGAGCGTGTGACTGCTTTCATGGTTAATAGCCACATCGTTTCTT TCCGAAAACCTAGTCACCATCTTCATGGCCCACCCGAGGTGAGATTAGATTGGAGATTATGCTGACGTGGAACCTTCTACGTTTTTTGAAGAACACGTGT CAACATCTCAATTCGATGTTGATCCATTCAGTATCGAAAAAGAGCTAGATTCCTTGTATCATGCTTATGAGTAAATATTTACTTCAGTCTTTAGAACCTT ACTCATATACTAGTTTGATTTATAAAAAGAAAATCTAAATTAGTCCTTAAAAAGAATAAAGATTGTAAATGTCAGTCTAAATAGTTATATGGCTGAAATG TTATCATGAAATATGATTAACCGACCCACATTTACTATTTTTTTGGACTATTTTAAGTTTTTTGATTTTCTCGAAAAGAAATGGATACAATTTTCTTTTC GATAAAAGTATAGGCTTTAGTCTTTTAAGAATTAAGATATATAGTTAGGGATATTTTGTAATGCATGGGGAGGCGAAGTCGAACCAAATGGTTTGTTTGA AATAAATATAAGTTGTATTTGAATTAAATTATTGAAGAGAAAGTATGGTAATATATAGTGTGTGCAAATGTCGTGGCTGGAGCAGGATCGGTCAAATCGT TCCCAGATATATAAACGGCTTGAATAGAAGTTATGAGTTATTATCTGAGGATGATAGAACTTGTGCATGATTTTATTGTAATGAATTGGTATATGTTGAT TTAATGGATATCAATGAAATTATAGCACGTTGATTTAGTAGATTGGTTTAAGTAAGTTGATTTTATTTTTAATTTCGAACGAAAAGTTGATGATTAGATA TTAATTTTTTATCATTCTCTTCAATGATAATGTATGAGTTTTATATATGGACTTTATGTTTAATCAGTATTAACTCTTCAAAAAGTAATATAAATAAATA ATAAATAATGCAGTAAACTAAACGTTTTTCCATAGTA
• Tissue: pods
• Gene name: LI_gene_146379;
• Additional information: details;

Expression of Ll_transcript_434495

FPKM

• PAB: 0.6
• PNAB: 0.7
• PS1: 3.5
• PS2: 2.2
• PS3: 4.1
• PW1: 1.9
• PW2: 3.1
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_434495

• Blastp: Demethylmenaquinone methyltransferase from Lactobacillus with 30.57% of identity
• Blastx: Demethylmenaquinone methyltransferase from Lactobacillus with 30.36% of identity
• Eggnog: Methyltransferase required for the conversion of demethylmenaquinone (DMKH2) to menaquinone (MKH2)(COG2226)
• Kegg: Link to kegg annotations (LJ_0053)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454586.1)
• Pfam: ubiE/COQ5 methyltransferase family (PF01209.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;