Ll_transcript_434114

• Id Trinity: TRINITY_DN46692_c5_g1_i2
• Name Transcript: Ll_transcript_434114
• Sequence: TCAATCTCTCTGAAACTGAAGCAGAAGTTGAAGCAACGATGGAAGGGTTGAAGGGTTTTTTGAAGAAGGGTTTAGGCGAGATGGCATTTAACGCCGGCGG CGGAGCCATCAACTGGTTCCCGGGACACATGGCCGCCGCCACGCGAGCCATCCGCCACCGTCTTAAGGTCGCCGACCTCGTAATCGAAGTCAGAGACTCT CGCATTCCGTTATCCTCTGCTAACGCTGATCTACAGCCATTGCTTTCTGGAAAACGACGCGTTGTTGCACTCAATAAGAAAGACTTGGCTAACCCTAACA TCATGCATAAATGGGTACGTTATTTCGAGACATGCAAGCAAGATTGCATTCCTATAAATGCGCATAGCAAGAGTTCTGTCAACAAGCTTCTAGAGCTGGT AGAGTTCAAATTGAAGGAATTAATTTCCAGGGAACCTACACTTCTTGTTATGGTGGTTGGTGTTCCTAATGTGGGGAAGTCTGCTTTGATTAATTCCATT CATCAAATTGCACAATCTCGCTTTCCTGTGCAGGAGAAGATGAAGCGAGCTACTGTTGGTCCACTACCTGGTGTTACTCAAGATATTGCAGGATTTAAGA TAGCACAGAAACCAAGCATATATGTCCTAGATACCCCAGGGGTGCTGGTTCCAAGTATCGCAAACATAGAAACTGGGTTAAAGCTAGCTCTTGCAGGGTC TGTGAAAGATTCTGTGGTGGGTGAGGAGCGCATTGCTCAATACTTACTAGCAGTTTTAAACATCCGGGGGACTCCACTTCATTGGAGGCACCTAAAAAAC CGGAGAATAGATGGGATTGAATATGATGCTGAGGAAAAACATGAATATAATCTGAAAAATCTTAAGCCAAAGAGAAAAAATATGCCAAATAGATCTGACT TGGTATATGTTCAGGACCTTGTGATGGATGTTCAGCATGCCCTCTATTCGACAGTAACAGAATACGGTCGAAACGTAGAAGACGAGAATGACTTAGAGGA CCTTATTGACAAGCAGTTTGATGCACTGCAGAAGGCATTTAAGATACCTCACAAGGCTTCAGAAGCACGGTTGATGGTGTCCAAGAAGTTCCTTACTCTA TTCAGGACTGGTAAACTTGGACCTTTCATTCTTGATGATGTCCCTGATGTCAAGCCTGTATCATAAAGATATCTTCACTATTCAATTGTGTAAGATCTCC TACCTTTATTTATATAATAATATATTTTATATTTTATTCTAAATTTTGTTGTCAAACTAATATGATTTATGATAGAACATTATAGGGCCATGCAGTTCAT ATAGCGGAATCCACTTAGTGAGAACAACAGCTATATGATTATTCTAAGTTTTGCTGCAAGTTGGTTTTATTAAAAAAGAGATGTTATTTTTGCTGAACTT GGAATGCAATTTAGTGAAGATTTCACCTCCTTGATTAAATGCACAACTTCATAATGTTGGTAGTAGTTCTAAATGGTAGGATATAAAAGAGTGTAGCAAT ATATCCATATTTGTTTTAGAAGGATTGGTCATCTCCATTAATTCAATTTTTTGCACAGTTTGTATCCATATTTGACTTATGATTTTTTGCACAGTTTGTA TTCAAAGGGAAAGGGAATAAAGTATCTCCTTACACAAGGAGATAAATTATCTCCTTAAATCTATTTATTGTTTGAC
• Tissue: pods
• Gene name: LI_gene_146479;
• Additional information: details;

Expression of Ll_transcript_434114

FPKM

• PAB: 0
• PNAB: 2.6
• PS1: 1.4
• PS2: 2.2
• PS3: 1.7
• PW1: 1.1
• PW2: 1.1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_434114

• Blastp: Short integuments 2, mitochondrial from Arabidopsis with 72.97% of identity
• Blastx: Short integuments 2, mitochondrial from Arabidopsis with 73.46% of identity
• Eggnog: Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)(COG1161)
• Kegg: Link to kegg annotations (AT2G41670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444057.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;