Ll_transcript_434117

• Id Trinity: TRINITY_DN46692_c5_g1_i4
• Name Transcript: Ll_transcript_434117
• Sequence: TCAATCTCTCTGAAACTGAAGCAGAAGTTGAAGCAACGATGGAAGGGTTGAAGGGTTTTTTGAAGAAGGGTTTAGGCGAGATGGCATTTAACGCCGGCGG CGGAGCCATCAACTGGTTCCCGGGACACATGGCCGCCGCCACGCGAGCCATCCGCCACCGTCTTAAGGTCGCCGACCTCGTAATCGAAGTCAGAGACTCT CGCATTCCGTTATCCTCTGCTAACGCTGATCTACAGCCATTGCTTTCTGGAAAACGACGCGTTGTTGCACTCAATAAGAAAGACTTGGCTAACCCTAACA TCATGCATAAATGGGTACGTTATTTCGAGACATGCAAGCAAGATTGCATTCCTATAAATGCGCATAGCAAGAGTTCTGTCAACAAGCTTCTAGAGCTGGT AGAGTTCAAATTGAAGGAATTAATTTCCAGGGAACCTACACTTCTTGTTATGGTGGTTGGTGTTCCTAATGTGGGGAAGTCTGCTTTGATTAATTCCATT CATCAAATTGCACAATCTCGCTTTCCTGTGCAGGAGAAGATGAAGCGAGCTACTGTTGGTCCACTACCTGGTGTTACTCAAGATATTGCAGGATTTAAGG TTTGCTGGTTTTATTTGTACGGCATTTCTGTAAACTATAGTCTATGGTAGAAAGACTTCATATATTTCGGGCATTTCTGTAAACTAT
• Tissue: pods
• Gene name: LI_gene_146479;
• Additional information: details;

Expression of Ll_transcript_434117

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.3
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_434117

• Blastp: Short integuments 2, mitochondrial from Arabidopsis with 77.54% of identity
• Blastx: Short integuments 2, mitochondrial from Arabidopsis with 78.86% of identity
• Eggnog: Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)(COG1161)
• Kegg: Link to kegg annotations (AT2G41670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444057.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;