| Id Trinity | TRINITY_DN46704_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_315976 |
| Sequence | ATTGTTCATAAATTTTTTTAGGGAATAACTTGAGTTTTTCCTAAGAAATTAAGGGGAATGAAGTTAAAGGAAGAAAAGAGATGAAAAATGAAAGAAGTTG ATGGTAATGACAAGGAACTGGGTTGAGTTGGGTTGCCTTTACTTTTCTTCTCATCCTTCTTTCCCTTTTCACAAAATCTAATCCTAATATTTAATTATCA CAAAACCAAACAAAACCATCTACAAAACAATCTTACATTGCTTCATTCATCTACCCCTTTTGATTCTTTGCCAACTTTTTCTTACTTCATATAACCCTCA ATCTCTTTCTGTATTTTTTCTTCGTGAAAAAAAAGGTTTTTTTGTTGACTTGATTGTCTAAATTGGTTGTTGTTGGGTCCAAGAGCCAGAGCTATGCAAG GCCAACTTGTGTGTAGTGGCTGTAGGAGCAATTTGCTTTACCCTAGAGGGGCACCAAATGTTTGTTGTGCACTGTGCAACACAATTACATCTGTTCCTCC ACCCGGAATGGAAATGTCTCAACTTTACTGTGGAGGCTGTAGGACATTGCTAATGTACCCATGTGGAGCTACAAGTGTGAGATGTTCCTGCTGTCACACC GTAAACCTTGCACCGGCGTCTAACCATGTCGCCCATGTGCATTGTGGGAACTGCCGGACAACGCTCATGTATCCTTATGGAGCTCCCTCTGTCAAATGTG CAATCTGTCACTATATTACTAATGTCAGTATGATCAATGGAGGGTTTCCAATTCCTGTTCATAGCCCTAATGGGATGACCAACTCTGCAACAGTACCTTC TACTTCAACATCAATGCCTCAATCTCAGAGTCACACTGTCGTCGTAGAAAATCCGATGTCTGTTGATTCAAATGGGAAATTGGTGAGCAATGTCGTTGTT GGCGTTACAACAGATAAAAAATAATGCCATCATGCTTAAAGGATTCAGAATATGATGCATTATGATAATTGCTGTGCCATGAAGATATTTTTGTTGTTGA AATGGATCTTTTTCAAATACAAAGGGTTAGACAGATATTATGTAAGAATGTATATGAGAAGGACAAGTGAAAAGGGCTTAAAACGTTTTTTTTTTTTTGC TTTCCAAATCCTACTTTGTTGTTGGCTCTTGAATCCATAGCCACAAATCAATTTGGTTCATTGAGCTTGTATCTTGAATTGCAAGTCCTGGATGAGCATA TGGTGTTATTTCTTTCAAGCTTGTGCTTTTCTTGATTATATATGAGAAGGATGTGTTGATATTTGATAATGATTGTTGCATATGCAATGCATGATAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_146565; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315976
| Blastp | Protein LOL2 from Oryza sativa with 63.84% of identity |
|---|---|
| Blastx | Protein LSD1 from Arabidopsis with 66.31% of identity |
| Eggnog | LSD1 zinc finger domain containing protein, expressed(ENOG4111MH5) |
| Kegg | Link to kegg annotations (4352767) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435213.1) |
| Pfam | LSD1 zinc finger (PF06943.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |