| Id Trinity | TRINITY_DN46704_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_315990 |
| Sequence | ATTGTTCATAAATTTTTTTAGGGAATAACTTGAGTTTTTCCTAAGAAATTAAGGGGAATGAAGTTAAAGGAAGAAAAGAGATGAAAAATGAAAGAAGTTG ATGGTAATGACAAGGAACTGGGTTGAGTTGGGTTGCCTTTACTTTTCTTCTCATCCTTCTTTCCCTTTTCACAAAATCTAATCCTAATATTTAATTATCA CAAAACCAAACAAAACCATCTACAAAACAATCTTACATTGCTTCATTCATCTACCCCTTTTGATTCTTTGCCAACTTTTTCTTACTTCATATAACCCTCA ATCTCTTTCTGTATTTTTTCTTCGTGAAAAAAAAGGTTTTTTTGTTGACTTGATTGTCTAAATTGGTTGTTGTTGGGTCCAAGAGCCAGAGCTATGCAAG GCCAACTTGTGTGTAGTGGCTGTAGGAGCAATTTGCTTTACCCTAGAGGGGCACCAAATGTTTGTTGTGCACTGTGCAACACAATTACATCTGTTCCTCC ACCCGGAATGGAAATGTCTCAACTTTACTGTGGAGGCTGTAGGACATTGCTAATGTACCCATGTGGAGCTACAAGTGTGAGATGTTCCTGCTGTCACACC GTAAACCTTGCACCGGGTACTACATATTTGTTTGCTGCCAGACATGTGAAGTTAGTGGTTTAATATTCATTGCTAGATAATATTTGTTTTCTATTTTATA ATGGTTGCGGTGTTTTGTTGATTTGCATGATCATTGAGATTGAGTATGGTTATCATAAATGGGGTTATCAATTCCTAGTGTGGAAGTTAGCAGGGGTGCA GTAAAGTGATACTTTGTTGTTCCCTTTCTACCCTTGTGTATGTTTCAAGTTTTATGTTGATAAGGTGTTTGAGAGGGGATTCTTGAAAGGTATCATGTCA TGCACAATTTAGCTATGTTGCTCACGGAATAAAAATCAATGTTAGGTTGTTGTTCACTCACCATGTCTTGCAATGACCCCTTACTATTTAGGTATTCCAT TTTGGGAAACTGTAATAGTTCGTTGATTTGGGATCTTTGTGATTTAGATGATTGCTAAGTGGCTTGGTAATTAGTAAGAAGCCTATTTCTCCCTCAAAAA AAGAAACTAGCCGATTTCTCTGGGGGAGGGAGGATCATCTGACCTTGATTTAGTCTTCCTTGCTAAATTGGCTGTCATTGGGAGATTCGTTCTTGACAAT TTTGAATTACTCGTTGATTATTTGCATTTACTCCAAAGCTGGTGTTATTAATTTTATTGTCTGTTTTATCTTGGTGGCAATTATGTTGGTGAATGCTATT CATTGTTCTCTTTAGAGCTCTACCACGAAGAACTCATACGTAAAATCTCATCGCTTACGTTACAAAAATGCTGGGTGCTTATGCATTAGTTCTATCTTCT TCACTTCATGTCACTCCAATGAAGGATTCCTTGTTATATTGTAATAACCTATAGTTATTATTCAATTATTTGAAGTTTACTAGCTTACTGTTGACGGGTT TTTTGTTTATTATAAAAAGCGTCTAACCATGTCGCCCATGTGCATTGTGGGAACTGCCGGACAACGCTCATGTATCCTTATGGAGCTCCCTCTGTCAAAT GTGCAATCTGTCACTATATTACTAATGTCAGTATGATCAATGGAGGGTTTCCAATTCCTGTTCATAGCCCTAATGGGATGACCAACTCTGCAACAGTACC TTCTACTTCAACATCAATGCCTCAATCTCAGAGTCACACTGTCGTCGTAGAAAATCCGATGTCTGTTGATTCAAATGGGAAATTGGTAAAACTATTTTGC TCTTAATTTTTTGTCAGTTCGGATATGTATTTATCAGCTGCCTTGATTAATTCTACTGTTTCATTCGAGCTTGGCAAGATTTACTTACAATTTGACATGT CACAGGTGAGCAATGTCGTTGTTGGCGTTACAACAGATAAAAAATAATGCCATCATGCTTAAAGGATTCAGAATATGATGCATTATGATAATTGCTGTGC CATGAAGATATTTTTGTTGTTGAAATGGATCTTTTTCAAATACAAAGGGTTAGACAGATATTATGTAAGAATGTATATGAGAAGGACAAGTGAAAAGGGC TTAAAACGTTTTTTTTTTTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_146565; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315990
| Blastp | - |
|---|---|
| Blastx | Protein LOL1 from Arabidopsis with 75% of identity |
| Eggnog | LSD1 zinc finger domain containing protein, expressed(ENOG410YHD1) |
| Kegg | Link to kegg annotations (AT1G32540) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435044.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |