Id Trinity | TRINITY_DN46704_c2_g2_i14 |
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Name Transcript | Ll_transcript_316018 |
Sequence | CCTTCATAGCTTACGTCATTGACTTGCCATATCACTAAGCTTTTTCATCTCTCTCTCTCTCTTCAAACCAAGCTCCCCTGGTTTTTGCTGCAATGGGTTG TGTTGGATCATCACAATCCAAGGTTGATGGGGCACTAAAAAAGATCCGGAAGCCTAAACCTTGGAAGCATCCTCAGCCAATAACGAAGACTCAGCTTATG CAATTGCGTGATGAATTTTGGGACACCTCTCCTCATTATGGTGGCCGGAAAGAGATTTGGGACGCGCTTCGAGCCGCTGCAGAGGCCGATGATCTATCCT TAGCACAAGCAATTGTGGATAGTGCTGGGGTCATTGTGCAGAGTTCTGATTTAACAGTATGCTATGATGAAAGAGGAGCAAAGTATGAGCTACCTAAGTA TGTTTTGAGTGAGCCAACTAACTTGATTGGGGACAATTAATAATAACATTAGAAATTGTAAATCATGTATATGTATATTATCTCATTGATTTGGCAACTT GCATAGGGTGGCAACACTTTTTCCTCTGCATCTGTACTCATCTTTGACATCTACCTCTAATGTTTCCTCAATGAACTGAACAAAAAAATGTTCCTTATGT ATTTAAGGACAAGTATCTTTCTACTTTGGTAAATACAAACTCCATTACATGGGAGTATTTTCCACTTCAAATTAGTGAAGTCTAATTTGGCAATAACTCA GACATTGTTCTGCTAACTTACTACATCATAAATTAGAAATAATAACCTCTGAAC BLAST |
Tissue | pods |
Gene name | LI_gene_146570; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_316018
Blastp | Ubiquitin domain-containing protein 1 from Silurana with 49.61% of identity |
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Blastx | Ubiquitin domain-containing protein 1 from Danio with 48.44% of identity |
Eggnog | Ubiquitin domain containing(ENOG410XRPV) |
Kegg | Link to kegg annotations (448143) |
CantataDB | Link to cantataDB annotations (CNT0000677) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425711.1) |
Pfam | Ubiquitin-binding domain (PF16455.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |