| Id Trinity | TRINITY_DN46704_c2_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_316005 |
| Sequence | GGCACTGAAATTGATTCAAATAGTTTAGTAAATATTGCTTTGGAAACTGTTTTGCGTTTTGCGCCCTTGTTCTATCAGGGTTAGTTTGGATCTTTGAGAT TTTTTGTCGAACTGCAATAAATTTGGTGGAAACTAAACTACCAGAATGGAGAAGGCCTATAAACAGCATAACGTTTCCACTGTTCTGGTCTGTTATAAGT GCTGTTAATGCTTTAGTTGTAGGGATTAGTCAATTTTCCAGCAATTAATTACTCCACTTTCGTGCCGACTCCAGCTAGTGGGATAAACTGATAAGGGTTT GATTGTTGTTTTAAGGGCATAGCTAGAAGAACATCATTTGATGTTTTGTTGGTATGAAAACGTGTATTTCAAATGGACAATCCCCCGTCATTATTCATTT TTTTGGTATTTTGTTTCTAAGATTAAATTGTCAGTCAAATTTCTCCGTATTTGTTACTGTTAATTCTCATGATCAGATTTCTCTTTCTTAACAATCTTTA GAATTATCATATTAGTAATTTGTTCCTGGTATGAACATTTTACCCCAATATAAATTTGATATTTCAACAGGGGAACTAAAACAGATCCGAAAGCCTAAAC CTTGGAAGCATACTCAGCCGATAACGAAGGCTCAGCTAATGCAACTGCGTGATGAGTTTTGGGACACTGCTCCTCACTATGGTGGCCGGAAAGAAATTTG GGACGCGCTTCGAGCTGCTGTCGAGGCTGATCTATCTTTAGCACAAGCAATTGTGGATAGTGCTGGGGTCATTGTCCAGAGTTCTGATATGACAGTATGC TATGATGAAAGAGGTAACTGGTTCATGTTGCATTCGCTTATTCCCTAAATTCTAAAAGGCTGAAATATGTTTTTGATCTGTACAAATGTTGGTCGTTTTG ATATCCATCCCTCCTTTTTATTTTTTTGGTGTTTGGTCCCTTTTTTCCCTCCTATTGTCAAGTTTAGATGTTAAAGGCTGACATGGCTGACAGAGTTCTA TGTCAGCAGTGCCACATTAAAGACACATGGCTATAGGGACTAAAAAAACCGATATTTTACAAGGACAAAAAAATTCCCTTTTTTATTACGCTAAGCCCCT CCTTCCCCAATTCCTAACCTTCTTGTGTTGAAACCCTTTCTTCTCCATCACAAGTTCATAACTAGCAACCACCACCACCCTTCACCATTACAACCAGCCA CCACCACTACCCACTCAGAACAGAACAACTCTCATCCTCAAACAATGGGTAAAAATGGAAAACAAAGCGAGAGGTGTTTGTAGAGGTGCGTGACGGATCT TAGACAACAGGTGGAGGAGGAAAACATGTGTTAGGTGTTGTGCCGTAGTTCTCAGACGACATCTGAGTAGCGACGACCTATTCGTGCAAGGGAAGTTGCA AGTTCATGCTTTTGGCAGCTCTAGTGAATCACAAAGGCATCGTTGGAAGGCCGAGTCTTGCTATTTCATCTTCCTCTCTTTTTTGGCTTGATGGCCAGTA CTAAAAACAAAATGGAAAAATTAGGGACTAAATACCAAAAAATAAAAAAGAGGGACGAATATCAAGTTGACCCACATTTATAGGGATAAAAAACATATAT ATATAAAATAAAAAGGAACCATATATTCATAGGATACAATCTGATTTGGTTTCTATAAGCTGAAATGGTCTCCATTCAAAAGTTAAAGACTCAGTTGAAT CAATTTGAAATCAGGATTCTGTTATGAAATTGGAAGCTAAAATGAAAAGCATCCTAGTACTTCTATGACATGAACCATGTGAGCTTTTAGGCATCACTGT TTCTTGTACAAATGTTTGAAAACAAGGTGGCATACTTGTAATTTATTTTCTTATACCAAACAGGCCCAACCTTTTGTTTTCAAGCTTAAAACATATTTTG AAGTTTATATAGTGCAGGAGAAATACAGTAAAAGAGGTAACACTAGCTTAGAGTGAGATACTAAAATAAGTGAAACTTCCGGACCATTTGCGAGTTGAGT TTTGGAGAGAAAGGAAAATGTAAGGTTTGGGAGTCATGAAATACATTTATAAGATGACACTAAAATTTCTATTTTCTGCTTGAAAATTCAATTCGCAATC GGACGTTAACGAAACAAATTCCACAAAACTAAACTCAGTTGATTGGAATCATAGCATGTTCAGTTTTGCAATATTATATCCATCAATGTTTTCTTGATTT GATTCTTTGTGCAATATTTGTTATGCAGGAGCAAAGTATGAGCTACCCAAGTATGTTTTGAGTGAGCCAACTAACCTGATTCGGGACAGTTAATAGCATC ATTATAAATTGTAACATTCATGAGAAAGAAATTGTAAATCATGTAAATTATTATCTCATTGATTTGGAAACTTGCATAGGGTGACAACACTTTTTACTTG CATTGTACTTACCTTTGACATATACCTTTAATGTTTACAATGATAATTGAGCTTTAATATCATACTAGATGGTGAAGTCGGCTACGTAAGTCGAACAATA TCATAATGTTCTATTATAACTTAGGTTTATCGACAAAATGTTGATATTTAACTATTTCTTAAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_146570; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_316005
| Blastp | Ubiquitin domain-containing protein 2 from Bos with 49.47% of identity |
|---|---|
| Blastx | Ubiquitin domain-containing protein 2 from Homo with 40.28% of identity |
| Eggnog | Ubiquitin domain containing(ENOG410XRPV) |
| Kegg | Link to kegg annotations (541134) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456376.1) |
| Pfam | Ubiquitin-binding domain (PF16455.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |