| Id Trinity | TRINITY_DN46711_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_314503 |
| Sequence | CTTAAATTGCTTGCTTAAATTATTAAGCGCGCCTAGCTTATTTGTCACTCCTACCATTCTCAATTATCAATTCACAAGAGGGTCCTTCTCCTTCCTATGA AATTCAATGCCATAGCTTCAACTCTCTTTTATCACTACAAACCTCAGTACTTTCTCCTCATATAGTTCAAGTTAATTTCAACAACTACCTTAGTACTCTT CTCCTCACCTTGTTCAAGTTAATCTCAACAACTTCCTTCATCAAATATAGATTATATATCATTATAAACAGCTAGGATCCATGCAAACATTCTTACAGCA AAGATCCAAGACGCAGTTTATAGCAGGTACTCTTTTGAAGAAGGGTCCTGCTCATTTTGCTGCTTATACTTCTATCCTCCTCCTTCTTATTTTCTTCAGT GCTTCCACCGTTTGTTCCATATGGGCTACACTTTCCACCGCCGATAGTAAACACAAATCCACCAACAAAACCATCGTGGCACCTATTTCTAGAAACCATA ATGGGAAAAGGTTACTCCAAAACACACTGAATTGTACCACTACTGGGAACCAAACATGCTCAACCCGTTACCCAACAACCTCAACAACGTTTGAGAAAAA CGATGAGACATGCCCAGAATACTTCCGGTGGATCCACGAGGATTTGCGCGCATGGAAAGCCACTGGGATAACCAGGGACATGGTCGAGAGAGCAAGCACT ACAGCACATTTCAGGTTAATAGTGAAGAAGGGGAAAGTGTACGTGGAGAAGTATAGGAAATCGATACAGACGCGTGATATTTTCACGATATGGGGCATAA TGCAACTTGTAAAGAAGTATGAAGGAATGGTGCCAGATCTAGAATTGATGTTTGATTGTGATGATAGACCAGTGGTCCTAGCAAGTGATTACAATGATCA TGACCGCAACAAAATCACGGGTCCTCCACCATTGTTTCGCTATTGTGGTGATCGTTGGACTCATGATATTGTCTTCCCTGATTGGTCCTTCTGGGGTTGG GCTGAGATTAATATAAGGCCTTGGGAATATGTGCTGAATGATATTAAAGAGGGTAATAAAAGGATAAAATGGAAGGATAGAGAACCATTTGCGTATTGGA AAGGAAACCCTGCTGTTGATGAAACCAGAAAAGATCTCCTCAAATGTAATGTTTCCGATGCCCATGATTGGAATGCTCGTTTATTTGTGCAGGATTGGGA AAAAGAGTCTGAACAAGGATACAAAAATTCAAACGTGGCAAATCAATGCACATATAGGTACTACATCTTTCGAATCATATACCAATCATAATTTTTTTAT CGATAATTTTTTAGAATGTAAATATTGGTATGTTAGTATTTTGTTGTGGGTGAAACACCACCTCAACCTTCTTCGTTCTAACCATCAAACCACCTTATAA TTCCCTTTTTGTTGTTGATGGTGAGACTCAAACCTACAACAACTTCCTGTATTCCGGTCCTTAAGACAATCATCTTCATCATTTCAGGCATAAGTCTCAG CTCGAATTTGTTTTGGATTATTATTGTATTTGTTTGTTGTGTGTAATTATCTTCATCTCTATCAGACACAAGATTTATATCGAAGGATATGCGTGGTCCG TGAGCGAGAAATACATCCTAGGTTGTGATTCGGTGACGCTGTTGGTTACACCTCGTTTTCATGATTTCTTCATAAGAAGCCTACAGCCATTGCAGCATTA TTGGCCTATTAAGGACAATGACAAGTGCCACTCCATCCAACATGCTGTTGAGTGGGGTAATAATCATACCCAAAAGGCACAAGAAATTGGTAGAGCAGCA AGCAAATTTATTCAAGAAGATCTAAATATGGATCATGTATATGACTACATGTTCCATTTGCTAAATGAATATGCAAAGCTCCTAAAGTTTGAGCCTACAG TGCCTGAAGGAGCTGTGGAACTATGCTCTGAAGCCATGGCTTGCACAAGAAATGGGACAGAGAAGAAATTTATGAGTGAATCCTTTGTTGGTGGGCCTTC AATAAAAGCACCATGCTCCTTGCCTCATCCATTTGAGCCCAACACGTTAAGATTATTTTATGCCAATAAACTTAATGTAATCAAACGAATTGAGAAGTGG GAAGATGAGTACTGGAGTCAAAATTAGCAACTGCATACATTACACACCATTCAATTAATTAAATCTCAATTATTAGCAATATAAATTTATTAACACAATC TATGTTATTTACCATTTTTACCCAGGAATTAATATTTTTTTCTTTTAGTTTCAAAGATTAAGATGTAGCATTATAATTATATTTTTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_146649; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314503
| Blastp | O-glucosyltransferase rumi from Sophophora with 21.89% of identity |
|---|---|
| Blastx | KDEL motif-containing protein 1 from Homo with 31.67% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (Dpse_GA16050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423299.1) |
| Pfam | Glycosyl transferase family 90 (PF05686.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |