| Id Trinity | TRINITY_DN46718_c3_g1_i33 |
|---|---|
| Name Transcript | Ll_transcript_315784 |
| Sequence | GTTATCTTATATTGTTAGAGAGCATTTGTTTTGAAAAGTGAAACATTCTATCTTTCTCAAATGTCCAGTGAGGATAGAACTGCAGTCATGATTTCATGGC GCAAAATCCCACCCCTTCTAAACGACGTCGTTCACCCCTCCACTACCACACTCTCTTTCCCCAACCCCACGCGCTTTCACTTCGCGTGTGTCTCACTCGC ACAACCCAAACTCGTTCATGATTTCTCTCCCTCTCTCTCTCAGCTCCTCAAACACCCTCTCGCCGTCCTCGCCTTCCTTCCCAGAGACGCCGCCCTCTTC GCCGCCGGAGCCATTGCCGGAGCTGCTGGTAAAACCGCCACCGCACCCCTCGACCGTATCAAGCTCCTCATGCAGACTCATGGGGTGCGGGTTGGACAAG ACAGTACTAAGAAGGCAATCAGTTTCATTGAGGTAATATTCAATCTTTCTTATTTCAATCATCCTAATTTGTTCTTAGCTGAATGGTTATTCTTCCATTT TTTTCAGCATGTATATTCAAGAGTATGATGTTTTGTCCTTGAGTTGTAAATGTAATAAGTCGATTGTGTAAATGCTATAATCTGCTTCAGTACTTCCTTC TGGCCTAAAACTTGACTAGTTTGGTGTCTAGTAGGGAATTGGGGTATGAGATTTTCGTGATTTTTCCAAAACCGATTTGATAAGGTCATATGAGCACATA TTATAACACCTTTAAAAGGTGTATGCAAGGGTTTTAAAAAATACACTCCCTCACAAACCGAAGAGAGTATCAAGTTTCATTGCTGACAAAAGGGGGCTCT TTTCAAATATTTGTAACAATAGGCCGATAGAATAGGTTCATGTCTTTGAATCATATCAGCCATGGCGAGTGCTCTTGTATTTAAGAGAACTCATGATTTT AGAAGTGATGCTTCCCTCGACTATAACTGAAAATCAAATAAGCTAAAAGAGATACGGCAAAGAAGGAATTTCAAGAAGTTCCGTAACTTCTTGATAGAGT CCATTGCCCGGATTAAACATTGTATATATCTACTTCCGACTGGGAAAAAGGCCCTTGTTGAAACGGGATCAAGGTGGTTGCATGACCTTTGTGTTTGTTA ATGCTTAACACATTTTGTTCGCTCGTTAGTCGTTACTAGTTAGTACTTAATAATTTATTTACGGTGTTGGTTGGTTAGACTATTTGCTCTTAGTGGTGAT CTATTGTAACTGTATCATGTATAAAGGAAATTGGCTAATTCTATTTGTGAAGACTACCAGATTACTAATACAAAGTTACTTTTGTTTCTAATTATTTTCC GTATTAGATAATTTATATCTACAACATTGTGTTTCAATTCATATATGTAGTTTATTGGCCTCTCCGGTCTCTTATCTTGATGATCTTGTTTTTCCGTCCG TCATAGATGCACTGTGCCCTTTAATCAGAACATTTCTTTATTTCTTTTTTTGGATATTGCATTGACATAAATTATAGGCCATAACAGTTATAGGGAAGCA AGAAGGCATTAAAGGTTATTGGAAGGGTAACCTCCCCCAGGTGAGGACAATGAAGAAGAAATTTATTGGTATTCCTGTATTTATATCTCCTTATAAGATT GACCAGTCTTGTCATTTGTTTTAGTGTTTCTTCTATCGTGTTCCAGGTGATTCGGGTCATACCTTACAGTGCAGTCCAGCTTTTTGCTTATGAAATTTAT AAGGTTTCCTCTGAACATCTTACGAGAAGTTCTACGAATAAGTAAGTCGTATCCGTGCCTGATGTTCTGTTTTTGGATTTACAGAAATTATTCAGGAGAC CGGATGGTGAGCTCTCTGTTGTGGGAAGACTTGCGGCAGGCGCTTTTGCTGGCATGACATCCACCTTTATAACTTATCCATTAGACGTCCTGAGATTACG ATTAGCTGTTGAACCTGGTTCCCAAACGATGTCAGAGGTATGATTGAAAAAAAAAGCAAATTATTGTTTTGGTATATGATTATAGCATTGTAATGTCTGA CACTAATACCACTCTGTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_146698; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315784
| Blastp | Probable envelope ADP,ATP carrier protein, chloroplastic from Arabidopsis with 49.28% of identity |
|---|---|
| Blastx | Thylakoid ADP,ATP carrier protein, chloroplastic from Arabidopsis with 59.6% of identity |
| Eggnog | Solute carrier family 25(ENOG410ZRF1) |
| Kegg | Link to kegg annotations (AT3G51870) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450351.1) |
| Pfam | Mitochondrial carrier protein (PF00153.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |