Id Trinity | TRINITY_DN46718_c3_g1_i9 |
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Name Transcript | Ll_transcript_315758 |
Sequence | GTTATCTTATATTGTTAGAGAGCATTTGTTTTGAAAAGTGAAACATTCTATCTTTCTCAAATGTCCAGTGAGGATAGAACTGCAGTCATGATTTCATGGC GCAAAATCCCACCCCTTCTAAACGACGTCGTTCACCCCTCCACTACCACACTCTCTTTCCCCAACCCCACGCGCTTTCACTTCGCGTGTGTCTCACTCGC ACAACCCAAACTCGTTCATGATTTCTCTCCCTCTCTCTCTCAGCTCCTCAAACACCCTCTCGCCGTCCTCGCCTTCCTTCCCAGAGACGCCGCCCTCTTC GCCGCCGGAGCCATTGCCGGAGCTGCTGGTAAAACCGCCACCGCACCCCTCGACCGTATCAAGCTCCTCATGCAGGTGCACGCACGCTTTTTCTTTATGT GTGTAATCATTATAGTCTAGTATCTCATTTGGGTTGTGTTCAAAATTCAATTTTTAAATAACAAGTTATGAAAAATGTTGTTTTTATATAGATTAATAAT AGTTGTTTAATTTTTTTATCGGCAATTTTTTAGAATGTAAATTTGTGAGTAAGTTATTACTTTTGTTGTGGGTGAGACAACAGCTATGGTGGGACTCGAA CCTACAACTTTTTGCGCTCCAGTCCTTAAGATCACCGTCTTCATCAACAGACCACCTTATGACTCCCAGTTTTTTGATACTTAGTGAAGTTTTAAATTGT GGTTATGGTTATAGCCACTTTTGAAATCTTTACATTACATAGTAGTGGGGGAAATGTGTGATATGGTTTGTCTAGGAATTCAAGAAAGAACTCGGAGAAA ATGAATTGCGGGAAACTCTATGAATTGAAAGAGTTTCGTGATAGAGATTTATCGAGAGAATAGGAAAGGTTGCAAAAGAGAAAAGTTACAACAATAAATC GAGTTGAGTGGTTTACTCTACATGTACCTATTTATAAAACTAGGAACCAACTCTAACAGAATATAGCTGGCATACAACTACTAGATATTACAATTTAACT CTTATCAATGTGCTGCAAATATGTTCGCGATGTAGTTTTAGTGACTCTCGAAATCTTAACATTGTGGCGTCCATAGTGGTTGTGGACCCGGGTTTAAAAC CTTGCTAGTTACTTTTGTAGAGGTGGAATGTGAAAAATGTCATTTTTTCGAAATTGTCTTGAAAATTCGAGCTTCCCGAAAAATTGTGTATTTTTATCTT CATAAAAACCATTTTTTGGTAATTTAGTTAGGCTTGCAAATATGTTAGATTAAAACTAAAACAACTTTTCTCTCAAAAAATGAAAAGTTAAAGCTGTTTT GGGTTTGGGTTAATGTTTGCCAAACACACTTTTAGTGATGGAATTGAATGTAATCCTTGTTTGGAAGCTGTAGTGGAAGTGGATGGAATGGTAAGACAAA GAATGTGCCACTTGCTATTTTGATTTTACTATGCTAATTGGATTTGGATTAGCTTATTCTGTGTTCCGGAAAACATATAATCAGAATGCTGTGGAGAGAG TATTTGTTTGAAAAGCTGTTTTCGGGTGAAAATAATCAAATGTATTGCAGACTCATGGGGTGCGGGTTGGACAAGACAGTACTAAGAAGGCAATCAGTTT CATTGAGGCCATAACAGTTATAGGGAAGCAAGAAGGCATTAAAGGTTATTGGAAGGGTAACCTCCCCCAGGTGATTCGGGTCATACCTTACAGTGCAGTC CAGCTTTTTGCTTATGAAATTTATAAGAAATTATTCAGGAGACCGGATGGTGAGCTCTCTGTTGTGGGAAGACTTGCGGCAGGCGCTTTTGCTGGCATGA CATCCACCTTTATAACTTATCCATTAGACGTCCTGAGATTACGATTAGCTGTTGAACCGGGTTCTCGAACGATGTCAGAGGTCGCTTTGAGCATGCTAAA GGAGGAAGGATTCGCATCTTTCTACAAAGGCCTCGGACCGTCTCTTATTGCGATAGCTCCTTATATTGCAGTGAACTTTTGTGTTTTTGACGTGTAAGTG AATATATTATTCTCTGACCCTCTCGCTAGGTCTGAGCCTCGTACACTATGCCGTCCTTTTTATATTTTAAGTCAATTTTGCGAGAATGCACTTGGACTTG GAAATTGAAAGCTTCTGTGGATAATAGATTAAAGAAGTCATTGCCGGAGAAATATCAAAACAGAACTGAAACATCAATACTCACGGCTGTGCTTTCGGCA TCTCTTGCCACTCTTACATGCTATCCTTTGGACACCGTAAGAAGACAGATGCAATTGAGGGGTACACCTTATACGACGTTACTCGAAGCCTTTTCAGGTG AAGAATGATGAACACTCCTGTTTAATTTTTTCAGCATCAGCAATTTATAATCACCCACGGATTTATATTCAAGTGCATATTAGTTACAAACATCCTAAGA GGGTGAGTTTGGCGCAACAGTAAAGGTTGTTGCTTAGCGACCATAAGGTCACTGGTTCAAATCCGGGAAACAACCTCCCTGCTTGTCGATCTTAATGCTT ATCCAAAGGTACTTGATGCAGGTATTGTGGCAAAAGATGGAGTTATTGGTTTGTATAGGGGATTTTTGCCCAATGCTCTAAAAACACTACCAAATAGCAG GTTCATTTCATCTTCTTTTATCTAAAGTAATAACATTATGATATATATATATATTCATTGCTTTACCTTTAAACAATGCTTAGAAACATGCTTTTCTTGT CATTAGTTTCATGATTTGTCTGTTGTTTCTTCACTCTGCAGCATCAAGCTTACCACATATGACATTGTTAAGCGCCTAATCGCGGCTAGTGAGAAAGAGT TTCAAACGATCACGGAGGAAAACCGCAACAAACAGAAGAACATCAACAATGGCAGATAGTAAATTTATGATTCATAATGGTTTTGCTGGAATTTTTGTGT TGAATTAATCTCCCTTTAGTACAACTATTTCAGTATTTCTGAGAATTTTGTAGGATATGTTTTGTACTTGCCTGCTAAAGTGGTAGACAAGGTTGGAAAT GGTTTACATTAAAGTAAGAAAAATGGAACTTTATATCATTCTATTTTGTCCAATCTATCTCATTCCATTTCCATCTATCCAAATAAATAGTGTATTGAAC TGGCA BLAST |
Tissue | pods |
Gene name | LI_gene_146698; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315758
Blastp | Probable envelope ADP,ATP carrier protein, chloroplastic from Arabidopsis with 45.38% of identity |
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Blastx | Thylakoid ADP,ATP carrier protein, chloroplastic from Arabidopsis with 81.46% of identity |
Eggnog | Solute carrier family 25(ENOG410ZRF1) |
Kegg | Link to kegg annotations (AT3G51870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450351.1) |
Pfam | Mitochondrial carrier protein (PF00153.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |