| Id Trinity | TRINITY_DN46728_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_314984 |
| Sequence | AAAGAATGTTATTATTATTTAGAAGGTTGGGAGAGATTGGAAATTGGTTGAAAGAACAATGAAAGTGGGCGAAGGAATAAGAGTGGTGGTGGCCGGAGAC AGAGGCAGCGGAAAATCAAGTCTGATTTGTGCAATCGCATCAGAGTCATTCCCTGATCTTGTTCCTCATCTCCTTCCTCCCACTCACTTGCCTCCTCATC TCTTCCCTCATCATCTTCCTCTTACCGTCATTGACACCTCTTCCGTGTAACACCTCCGACCTCTCTTTTCTCTTTATTCTATTCATTCCTATTATAATAT CTATTCTCCTTTCTCCAGATTGGAAAAACAAGCCAAGCGTAACGAAGAATTGAAGCGAGCCGATGTGGTCATTTTAACATATGCTTGCAACGATCCATCA TCCTTTACGCGCTTGCCTTCTTATTGGCTTCCCGAATTACACAACTTGGAGGTGAAGGCACCTGTAATCGTGGTTGGTTGCAAGTTAGACCTAAGGGATG AAAACCACCAAGTGAGCTTAGAGACTCAAATGTCTCACCTCTTACAACACTGCAAGTATGTTGCCACGTGTATTGAATGCTCAGCATATACCTTATACCA GGTCCCTGAAGTCTTTTATTTTGCTCAAAAAGCGGTGCTGCATCCCTTAGATGCATTGTTTGATCATGAAACCCAAGCTTTAACTGATCAATGTGTGAGG GCATTGAGAAGAATATTTGTTCTTTGCGATCGCAACATGGATGATGCCCTTGATGATACAGAACTCAATGAATTTCAGGTTAGATGCTTCAGTGCACCAT TGCAGTCATCTGACATAGCAGGGGTCAAAGCTATTGTTCAGCATAAAGTACCTGAAGGACTCAACTCTCATGGTCTTACTTTTCCAGGATTTATTTATAT CCATAAGATGTTTCTAAAGAAAGGGCGTCCAGAGACACTATGGGCTGTACTAAGAAACTTTGGATATGATAATGATCTAAAACTCCAGGATGATTTCCTT CCAATTCCATCTAAGATTGCCCCTGATCAGAGTGTGGAGCTGACCAGCGAAGCTGTAGAGTTTCTGAACGGTGTCTTCCGACTGTTAGATATGGACAAAG ATCGAGCCCTTCGACCCGCTGAAGTTGATAAGCTATTTTGTACTGCTCCACAAAGTCCGTGGAATGATGCTCCATATAAGGATGCAGCTGAGAGAACTGA CATAGGTTACATGTCTCTTAACGGATTTCTATCCCTGTGGGCTCTTATGACATTAATTGATCCACGACGTAGCCTAGCTAATTTGATTTACATAGGATAT AGTGGTAATCCTGCTGCAGCACTCCGTGTTACTCGTAGAAGATCCGTAGATCGCAGAAAGCAAGCAACCGAAAGGAATGTGTTCCAATGCTATGTTTTTG GTTCTAAAAATTCCGGGAAATCTGCTATTTTGGAATCATTGTTGGGAAGGCCTTTCTCAAATAATTATACTCCAACAACGGTTGAGCAGTTTGCAGCAAA TTCCATAGAATTACTAGGGGGAACTAGGAAAACTCTTGTATTGCGGGAGATACCAGAGGGTGCAGTATCGAAAGTTTTGTCAAATCAGGATTATTTGGCA GCATGTGATGTAGCTGTTTTTGTGTATGACAGCTCAGATGAACATTCATGGAAGAAATCCAGAGGTTTGCTTGATAAGGTTGCTAGACAAGGAGAACAAA CTGGTTATAAAGTTCCTTGTCTCCTTATCGCTGCTAAGGATGATTTAACTCCCTACCCAAGGGCAGTACAAGATTCAGTCAAGGTTACTCAGGAACTGGG AATAGAGGCACCTATTCACCTAAGTATGAAATTAGGGGATTCAAGTAACGTGTACAATAAGATTGTTAGTGCTGCAGAACACCCTCATTTAAGCATCCCA GAAACTGAGATTGGGAGGAAAAGAAAGCAATACCAACAACTTCTTCAAAATTCTCTTATTTTTGCCTCAGTTGGGACGGTTGTGGCAGTTGTTGGTGTAG CAGCAATGCGTGCATATGCGGTGAAGAAAAATTCTTCTGCTTAGTCTCACAGCAAGGACATGCTAACCAAGATGGAAACCTAAGTTAGAATACGTGATGT ATAGTATAGTAAAATAGTGACTTCATTTATTTTGGTGCGAAGATCCTAAATATGATGCCAGTTTTTGTTTTCTTCCAGCAAAAAATATTTTTTTGGCGTG GATGTTATATTTTATTAAGGGTCACTTATCATCTGATCATGCCTTAATTGAATTACAATGATCATTTTTTATTTATGGTCTCATTTCTTTAGAATGAATA TTGTATTTTATTTTATATTTAAATCAGGAGGTGAGGTTTATGTATTGAGTTTTTCTCTGAGAGGAAGAAAACACAAATATCAGCTAAAGGAACTTTAAGA ATGCAAATGGAATAGGATCATGATAACCTATTTTGTCAACTCTTTTGTTGATACATTGCATCAATAACAAAATGATTATAATTATACTGGTGTATAAAAA GAAAATGAAGCCTTGTGTGAAGCCTTTTGATTTCCATTGGAGATATATTGATGTCAGTCCCAAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_146749; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314984
| Blastp | Mitochondrial Rho GTPase 2 from Arabidopsis with 58.37% of identity |
|---|---|
| Blastx | Mitochondrial Rho GTPase 2 from Arabidopsis with 56.76% of identity |
| Eggnog | Mitochondrial GTPase involved in mitochondrial trafficking (By similarity)(ENOG410XRHW) |
| Kegg | Link to kegg annotations (AT3G63150) |
| CantataDB | Link to cantataDB annotations (CNT0002300) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456243.1) |
| Pfam | EF hand associated (PF08356.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |