Id Trinity | TRINITY_DN46728_c1_g1_i6 |
---|---|
Name Transcript | Ll_transcript_314986 |
Sequence | AAAGAATGTTATTATTATTTAGAAGGTTGGGAGAGATTGGAAATTGGTTGAAAGAACAATGAAAGTGGGCGAAGGAATAAGAGTGGTGGTGGCCGGAGAC AGAGGCAGCGGAAAATCAAGTCTGATTTGTGCAATCGCATCAGAGTCATTCCCTGATCTTGTTCCTCATCTCCTTCCTCCCACTCACTTGCCTCCTCATC TCTTCCCTCATCATCTTCCTCTTACCGTCATTGACACCTCTTCCGTATTGGAAAAACAAGCCAAGCGTAACGAAGAATTGAAGCGAGCCGATGTGGTCAT TTTAACATATGCTTGCAACGATCCATCATCCTTTACGCGCTTGCCTTCTTATTGGCTTCCCGAATTACACAACTTGGAGGTGAAGGCACCTGTAATCGTG GTTGGTTGCAAGTTAGACCTAAGGGATGAAAACCACCAAGTGAGCTTAGAGACTCAAATGTCTCACCTCTTACAACACTGCAAGTATGTTGCCACGTGTA TTGAATGCTCAGCATATACCTTATACCAGGTCCCTGAAGTCTTTTATTTTGCTCAAAAAGCGGTGCTGCATCCCTTAGATGCATTGTTTGATCATGAAAC CCAAGCTTTAACTGATCAATGTGTGAGGGCATTGAGAAGAATATTTGTTCTTTGCGATCGCAACATGGATGATGCCCTTGATGATACAGAACTCAATGAA TTTCAGGTTAGATGCTTCAGTGCACCATTGCAGTCATCTGACATAGCAGGGGTCAAAGCTATTGTTCAGCATAAAGTACCTGAAGGACTCAACTCTCATG GTCTTACTTTTCCAGGATTTATTTATATCCATAAGATGTTTCTAAAGAAAGGGCGTCCAGAGACACTATGGGCTGTACTAAGAAACTTTGGATATGATAA TGATCTAAAACTCCAGGATGATTTCCTTCCAATTCCATCTAAGATTGCCCCTGATCAGGTCATATACTTAGTACTTTGTTCTACTCTTGTCTTCCTGTTT CTTTAAACAGAAGAGGTTGGACTAGTAACCATTTAACTCTACAAATTGCAATATTGGTATTAATAATAACAGAAAATGTATTGTTAAATTAGGAAGAGTA AACTGTCAGCTACAGGTTTCTTAAGCCCTAGATACATGTAAATTCTAATATTCGCTATTCGCTGCTGCATTTCTTTTTATGGCTTGTGATTTCCTAAAAC GGAACATTGCAAATACTAGGTATAAATATTTCAATCTTTACAAATAATGTGAATTTGGTTGCACTTTCTGTTTAACTTTGAAATGATATGTTTTTAATTT CTTTGGAATCATGTTAAAGAGTGTGGAGCTGACCAGCGAAGCTGTAGAGTTTCTGAACGGTGTCTTCCGACTGTTAGATATGGACAAAGATCGAGCCCTT CGACCCGCTGAAGTTGATAAGCTATTTTGTACTGCTCCACAAAGTCCGTGGAATGATGCTCCATATAAGGATGCAGCTGAGAGAACTGACATAGGTTACA TGTCTCTTAACGGATTTCTATCCCTGTGGGCTCTTATGACATTAATTGATCCACGACGTAGCCTAGCTAATTTGATTTACATAGGATATAGTGGTAATCC TGCTGCAGCACTCCGTGTTACTCGTAGAAGATCCGTAGATCGCAGAAAGCAAGCAACCGAAAGGAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAAAT TCCGGGAAATCTGCTATTTTGGAATCATTGTTGGGAAGGCCTTTCTCAAATAATTATACTCCAACAACGGTTGAGCAGTTTGCAGCAAATTCCATAGAAT TACTAGGGGGAACTAGGAAAACTCTTGTATTGCGGGAGATACCAGAGGGTGCAGTATCGAAAGTTTTGTCAAATCAGGATTATTTGGCAGCATGTGATGT AGCTGTTTTTGTGTATGACAGCTCAGATGAACATTCATGGAAGAAATCCAGAGGTTTGCTTGATAAGGTTGCTAGACAAGGAGAACAAACTGGTTATAAA GTTCCTTGTCTCCTTATCGCTGCTAAGGATGATTTAACTCCCTACCCAAGGGCAGTACAAGATTCAGTCAAGGTATTACATTTTCAACTCAGTGTTATCA TATCATTGAATATACATTTTAATGGTTATGCATAATTTCATAGCTAAACCTGTAAGGTCAGGATGTTATCATCTATTATTTTTGGTGTAGGTTACTCAGG AACTGGGAATAGAGGCACCTATTCACCTAAGTATGAAATTAGGGGATTCAAGTAACGTGTACAATAAGATTGTTAGTGCTGCAGAACACCCTCATTTAAG CATCCCAGAAACTGAGATTGGGAGGAAAAGAAAGCAATACCAACAACTTCTTCAAAATTCTCTTATTTTTGCCTCAGTTGGGACGGTTGTGGCAGTTGTT GGTGTAGCAGCAATGCGTGCATATGCGGTGAAGAAAAATTCTTCTGCTTAGTCTCACAGCAAGGACATGCTAACCAAGATGGAAACCTAAGTTAGAATAC GTGATGTATAGTATAGTAAAATAGTGACTTCATTTATTTTGGTGCGAAGATCCTAAATATGATGCCAGTTTTTGTTTTCTTCCAGCAAAAAATATTTTTT TGGCGTGGATGTTATATTTTATTAAGGGTCACTTATCATCTGATCATGCCTTAATTGAATTACAATGATCATTTTTTATTTATGGTCTCATTTCTTTAGA ATGAATATTGTATTTTATTTTATATTTAAATCAGGAGGTGAGGTTTATGTATTGAGTTTTTCTCTGAGAGGAAGAAAACACAAATATCAGCTAAAGGAAC TTTAAGAATGCAAATGGAATAGGATCATGATAACCTATTTTGTCAACTCTTTTGTTGATACATTGCATCAATAACAAAATGATTATAATTATACTGGTGT ATAAAAAGAAAATGAAGCCTTGTGTGAAGCCTTTTGATTTCCATTGGAGATATATTGATGTCAGTCCCAAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_146749; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314986
Blastp | Mitochondrial Rho GTPase 2 from Arabidopsis with 55.85% of identity |
---|---|
Blastx | Mitochondrial Rho GTPase 2 from Arabidopsis with 55.85% of identity |
Eggnog | Mitochondrial GTPase involved in mitochondrial trafficking (By similarity)(ENOG410XRHW) |
Kegg | Link to kegg annotations (AT3G63150) |
CantataDB | Link to cantataDB annotations (CNT0002300) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456243.1) |
Pfam | Ras family (PF00071.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |