Ll_transcript_314987

• Id Trinity: TRINITY_DN46728_c1_g1_i7
• Name Transcript: Ll_transcript_314987
• Sequence: AAAGAATGTTATTATTATTTAGAAGGTTGGGAGAGATTGGAAATTGGTTGAAAGAACAATGAAAGTGGGCGAAGGAATAAGAGTGGTGGTGGCCGGAGAC AGAGGCAGCGGAAAATCAAGTCTGATTTGTGCAATCGCATCAGAGTCATTCCCTGATCTTGTTCCTCATCTCCTTCCTCCCACTCACTTGCCTCCTCATC TCTTCCCTCATCATCTTCCTCTTACCGTCATTGACACCTCTTCCGTATTGGAAAAACAAGCCAAGCGTAACGAAGAATTGAAGCGAGCCGATGTGGTCAT TTTAACATATGCTTGCAACGATCCATCATCCTTTACGCGCTTGCCTTCTTATTGGCTTCCCGAATTACACAACTTGGAGGTGAAGGCACCTGTAATCGTG GTTGGTTGCAAGTTAGACCTAAGGGATGAAAACCACCAAGTGAGCTTAGAGACTCAAATGTCTCACCTCTTACAACACTGCAAGTATGTTGCCACGTGTA TTGAATGCTCAGCATATACCTTATACCAGGTCCCTGAAGTCTTTTATTTTGCTCAAAAAGCGGTGCTGCATCCCTTAGATGCATTGTTTGATCATGAAAC CCAAGCTTTAACTGATCAATGTGTGAGGGCATTGAGAAGAATATTTGTTCTTTGCGATCGCAACATGGATGATGCCCTTGATGATACAGAACTCAATGAA TTTCAGGTTAGATGCTTCAGTGCACCATTGCAGTCATCTGACATAGCAGGGGTCAAAGCTATTGTTCAGCATAAAGTACCTGAAGGACTCAACTCTCATG GTCTTACTTTTCCAGGATTTATTTATATCCATAAGATGTTTCTAAAGAAAGGGCGTCCAGAGACACTATGGGCTGTACTAAGAAACTTTGGATATGATAA TGATCTAAAACTCCAGGATGATTTCCTTCCAATTCCATCTAAGATTGCCCCTGATCAGAGTGTGGAGCTGACCAGCGAAGCTGTAGAGTTTCTGAACGGT GTCTTCCGACTGTTAGATATGGACAAAGATCGAGCCCTTCGACCCGCTGAAGTTGATAAGCTATTTTGTACTGCTCCACAAAGTCCGTGGAATGATGCTC CATATAAGGATGCAGCTGAGAGAACTGACATAGGTTACATGTCTCTTAACGGATTTCTATCCCTGTGGGCTCTTATGACATTAATTGATCCACGACGTAG CCTAGCTAATTTGATTTACATAGGATATAGTGGTAATCCTGCTGCAGCACTCCGTGTTACTCGTAGAAGATCCGTAGATCGCAGAAAGCAAGCAACCGAA AGGAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAAATTCCGGGAAATCTGCTATTTTGGAATCATTGTTGGGAAGGCCTTTCTCAAATAATTATACTC CAACAACGGTTGAGCAGTTTGCAGCAAATTCCATAGAATTACTAGGGGGAACTAGGAAAACTCTTGTATTGCGGGAGATACCAGAGGGTGCAGTATCGAA AGTTTTGTCAAATCAGGATTATTTGGCAGCATGTGATGTAGCTGTTTTTGTGTATGACAGCTCAGATGAACATTCATGGAAGAAATCCAGAGGTTTGCTT GATAAGGTTGCTAGACAAGGAGAACAAACTGGTTATAAAGTTCCTTGTCTCCTTATCGCTGCTAAGGATGATTTAACTCCCTACCCAAGGGCAGTACAAG ATTCAGTCAAGGTTACTCAGGAACTGGGAATAGAGGCACCTATTCACCTAAGTATGAAATTAGGGGATTCAAGTAACGTGTACAATAAGATTGTTAGTGC TGCAGAACACCCTCATTTAAGCATCCCAGAAACTGAGATTGGGAGGAAAAGAAAGCAATACCAACAACTTCTTCAAAATTCTCTTATTTTTGCCTCAGTT GGGACGGTTGTGGCAGTTGTTGGTGTAGCAGCAATGCGTGCATATGCGGTGAAGAAAAATTCTTCTGCTTAGTCTCACAGCAAGGACATGCTAACCAAGA TGGAAACCTAAGTTAGAATACGTGATGTATAGTATAGTAAAATAGTGACTTCATTTATTTTGGTGCGAAGATCCTAAATATGATGCCAGTTTTTGTTTTC TTCCAGCAAAAAATATTTTTTTGGCGTGGATGTTATATTTTATTAAGGGTCACTTATCATCTGATCATGCCTTAATTGAATTACAATGATCATTTTTTAT TTATGGTCTCATTTCTTTAGAATGAATATTGTATTTTATTTTATATTTAAATCAGGAGGTGAGGTTTATGTATTGAGTTTTTCTCTGAGAGGAAGAAAAC ACAAATATCAGCTAAAGGAACTTTAAGAATGCAAATGGAATAGGATCATGATAACCTATTTTGTCAACTCTTTTGTTGATACATTGCATCAATAACAAAA TGATTATAATTATACTGGTGTATAAAAAGAAAATGAAGCCTTGTGTGAAGCCTTTTGATTTCCATTGGAGATATATTGATGTCAGTCCCAAAAG
• Tissue: pods
• Gene name: LI_gene_146749;
• Additional information: details;

Expression of Ll_transcript_314987

FPKM

• PAB: 4.5
• PNAB: 6.2
• PS1: 9.6
• PS2: 6.3
• PS3: 8.2
• PW1: 6.3
• PW2: 8
• PW3: 6.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_314987

• Blastp: Mitochondrial Rho GTPase 2 from Arabidopsis with 58.82% of identity
• Blastx: Mitochondrial Rho GTPase 2 from Arabidopsis with 59.01% of identity
• Eggnog: Mitochondrial GTPase involved in mitochondrial trafficking (By similarity)(ENOG410XRHW)
• Kegg: Link to kegg annotations (AT3G63150)
• CantataDB: Link to cantataDB annotations (CNT0002300)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456243.1)
• Pfam: Ras family (PF00071.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;