Ll_transcript_315012

• Id Trinity: TRINITY_DN46728_c2_g1_i12
• Name Transcript: Ll_transcript_315012
• Sequence: CCGAAGACCATAACTTCCCATCAGAGTAATCCAACGGCAAGAAATCAATCTCAACATCTAACGGTCAATATTGAATCTATCTCCCTCTATTAAATAAATA CCCCACGCCTCTTTCGTTTTAAGTTTTAACCTTCCATCTCGTAACCTTCACTTCCAACATCGAAGAACTCATTTTCTCTTTTCAAAAATAATATAAATAA AATTTTCTATGTTCTAATTTCTACGTTTTGAGTGTGAAGTAACATAACTTCACTTCTTTCTGCTTTTGTTTCTCTTTCTCCAGTTTCTTTACTTGCTACC GTTTGCGCCGGTTGTCACTGGTTATGAGATGTTGCCGGAGGCTGAGGGAAGAAGAAGAAGAACAAGAACAAGAACAAGACCCGTCGTTGTAAGAATATCG TGGTACGGGAAGGACCGGTAAGAGGTTAAACATCCAACGGTTGAGATCAGATCAAATCAGTGGGACCCACATAAATGGATAAACCAAAACTCACTAGAAC CCAATCCTCTCTCCTTCGTTCTTCTCCAACAATTCGATCCTCTATTCATAGCCTCTCTTCAATTAATGAAGATGATTTCAATAACGACGTCGTTGAGGAT GATAAGAAAAACAAAACCAACAACAAGAAAACCGGTCGAACCGGGTTCGCTTTTGCTTCATTGGGTTTCTTCACTTCGTGTCTCTTTTTCTACCTCTACT ACTTCTTCTACGAGGTACCCACTTCAGAGAATGTTCTTTTCGCGTTGATCTTCATCGCTGTTGCACTTTACTTCACATCGAAAAACAAAGGCTTAATCAA TCACTCTTTCTCATCAATAAAGCACTCCTGGGATGAGAACTTAAAAAGGTTCGGTTTTTTCAAGACCCAATCAAAACCGGTTCAATGGGTCATCGGAGAT AACACCGATATAGAATCCGGTTCAGTAAAGAAGAAGAACAAGATGATAAAAGAAGGTGTTGAGTTTTACAGCAATGGTGATTTCTACGAGGGTGAGTTTC ACAGAGGAAGGAGCAATGGGAGTGGGGTATATAACTACTTCGTGAATGGAAGATATGAAGGGGATTGGGTTGATGGAAGATATGATGGGTATGGAATTGA AAGCTGGAGTAGAGGGAGTAAATATAGAGGGCAATATAGACAAGGGTTGAGACATGGTTATGGGGTTTATAGATTCTACACTGGGGATTCTTATGCTGGT GAATGGTGTAATGGTCAGAGTCATGGTGTTGGAGTTCAAACTTGCTCTGATGGGAGTTGCTTTATTGGGGAGTTTAAGTTTGGTGTTAAGCATGGACTTG GGTGTTACCATTTTAGAAATGGAGATAGATATGCTGGAGAGTACTTTGGAGACAAAATACATGGATTTGGGATCTACCGTTTTGCCAATGGCCACTGTTA TGAGGGAGCATGGCATGAGGGCCGTAGGCAAGGTATCGGTACATATACTTTTCGAACTGGCGACCGAAAATGTGGCGAATGGGATGCTGGAAATCTCAAG CATCCTCTACCACCAATATCAGATGTTGCCCTTAGAGCAGTTCAGGCTGCTAGGAAAACAGCAGAAAGTGCTATGAAGTTAAGGCGCGTGGATGACCAGG TGAACAAAGCAGTGATCGCTGCTAACATGGCTGCCACTGCGGCTAGAGTTGCTGCTGTAAAAGCAGTTCAAAACAGGATGGATGGAAAATTTTGCGATAT TGATATCTAAGAATTAGGTGTTATCTTTTGTCTCGAATCGTAATTTTTTACTAATTCCGAGTAGCCCGATGAGCAAAAGCTTATTGGAGGTTAAGAGAGC AATGTTTTTTATGTTTGTCTAACCACACTGTAATCTGTATATAAACCATGTATATATATCAATGAAACATGAATTTCTGACCTTGTTTGTTTTGTCTTCA GAATATTTGTATAGACTGTGAAGTGATATTCTAAATTTCTTTAGCTTGAGGTATCGTTCATCCTTTTTGGTAATTATCCC
• Tissue: pods
• Gene name: LI_gene_146750;
• Additional information: details;

Expression of Ll_transcript_315012

FPKM

• PAB: 7.8
• PNAB: 7.5
• PS1: 13.1
• PS2: 3
• PS3: 6.7
• PW1: 5.4
• PW2: 9.5
• PW3: 8.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315012

• Blastp: Phosphatidylinositol 4-phosphate 5-kinase 1 from Arabidopsis with 35.8% of identity
• Blastx: Phosphatidylinositol 4-phosphate 5-kinase 1 from Arabidopsis with 35.8% of identity
• Eggnog: whole genome shotgun sequence(COG4642)
• Kegg: Link to kegg annotations (AT1G21980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414965.1)
• Pfam: MORN repeat (PF02493.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;