Id Trinity | TRINITY_DN46728_c2_g1_i7 |
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Name Transcript | Ll_transcript_315004 |
Sequence | CCGAAGACCATAACTTCCCATCAGAGTAATCCAACGGCAAGAAATCAATCTCAACATCTAACGGTCAATATTGAATCTATCTCCCTCTATTAAATAAATA CCCCACGCCTCTTTCGTTTTAAGTTTTAACCTTCCATCTCGTAACCTTCACTTCCAACATCGAAGAACTCATTTTCTCTTTTCAAAAATAATATAAATAA AATTTTCTATGTTCTAATTTCTACGTTTTGAGTGTGAAGTAACATAACTTCACTTCTTTCTGCTTTTGTTTCTCTTTCTCCAGTTTCTTTACTTGCTACC GTTTGCGCCGGTTGTCACTGGTTATGAGATGTTGCCGGAGGCTGAGGGAAGAAGAAGAAGAACAAGAACAAGAACAAGACCCGTCGTTGTAAGAATATCG TGGTACGGGAAGGACCGGTAAGAGGTTAAACATCCAACGGTTGAGATCAGATCAAATCAGTGGGACCCACATAAATGGATAAACCAAAACTCACTAGAAC CCAATCCTCTCTCCTTCGTTCTTCTCCAACAATTCGATCCTCTATTCATAGCCTCTCTTCAATTAATGAAGATGATTTCAATAACGACGTCGTTGAGGAT GATAAGAAAAACAAAACCAACAACAAGAAAACCGGTCGAACCGGGTTCGCTTTTGCTTCATTGGGTTTCTTCACTTCGTGTCTCTTTTTCTACCTCTACT ACTTCTTCTACGAGGTACCCACTTCAGAGAATGTTCTTTTCGCGTTGATCTTCATCGCTGTTGCACTTTACTTCACATCGAAAAACAAAGGCTTAATCAA TCACTCTTTCTCATCAATAAAGCACTCCTGGGATGAGAACTTAAAAAGGTTCGGTTTTTTCAAGACCCAATCAAAACCGGTTCAATGGGTCATCGGAGAT AACACCGATATAGAATCCGGTTCAGTAAAGAAGAAGAACAAGATGATAAAAGAAGGTGTTGAGTTTTACAGCAATGGTGATTTCTACGAGGGTGAGTTTC ACAGAGGAAGGAGCAATGGGAGTGGGGTATATAACTACTTCGTGAATGGAAGATATGAAGGGGATTGGGTTGATGGAAGATATGATGGGTATGGAATTGA AAGCTGGGCAAGGGGGAGTCGCTATAAGGGGCAATATAGACAAGGGTTGAGGCATGGTTATGGGGTTTATAGGTTCTATACTGGTGATTCTTATGCCGGG GAATGGTTGAATGGGCAAAGCCATGGTTTTGGAGTGCAGAATTGTTCTGATGCTAGCTGTTATGTTGGGGAGTTTAATTTTGGGGTCAAGCATGGACTTG GATGTTATCATTTTAGGTGAGTTTGATTTGTTCATGAAAAAGGGCTCTTCGTTTTTTATATTGTAGGCGATATTTAATTTATTTGCTGGCTTTGTTTTGT TGATTTTGTTATGTTGTTGATāBLAST |
Tissue | pods |
Gene name | LI_gene_146750; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315004
Blastp | Phosphatidylinositol 4-phosphate 5-kinase 9 from Arabidopsis with 35.51% of identity |
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Blastx | Radial spoke head 1 homolog from Mus with 40% of identity |
Eggnog | whole genome shotgun sequence(COG4642) |
Kegg | Link to kegg annotations (AT3G09920) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414965.1) |
Pfam | MORN repeat (PF02493.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |