Ll_transcript_315546

• Id Trinity: TRINITY_DN46730_c1_g2_i11
• Name Transcript: Ll_transcript_315546
• Sequence: ATTGAATGCCCATTATATCTTTTGGCAGTACAATTGCTGCACAATGGGGTTTTATTGCTTGTATATGTACTGAAATTCTCAGAAACCAGAGTTCTATAAA TTTTTTTTATCAGAAACTAGGGTTTCTGTCCTATCTGTCATTAAATATTAAATCTTATGCAACATTGTACTCAATAAATAAACATAATTTTTCAGCATAC ACCCTTGTGCTGGAGAGTGTAATTTCTTGAATTCATATTCCTTGCAGTGTTACGAGCAGGGATTACTATTCTGTCCTCGGGGTTTCAAAAAATGCTAAAA AATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCGGGAATTATCATCCAGATGTGAACAAATCATTACCAATCAGATTCCTCGTCAATCTCCATTACCA CATTTCAAATGACTTGACTAGTGACGTCTCAAGATTGGAGCATATGATATCTGTTATTTCTTAATATATGCTCCAGGTGAAACATATTCTCAGAAGTGTA CTTGTTGATGTAGATTGTGGGAATGCTATGCTTCTTTGGTTTCCTAAGAGGAAGGATAGTGGGTAAAGATGATTTATCCTTGGGTAATTTTCTTAGCAAT CTACCTACCATCTATCTCCCAATATTAGCAGTTTATCTTTGATTGTCATTAGAATATCTTAGAAGATCTCTTCTCATATATATATATAGGGCGTAACTCT AGTGAGAACAATTCTCATATTATCATATATATATATATATATATATATATATATAGGGAGTAACTCAAGTCACACAACCATACATGTAAGCTCAGGAACT TTAAGTGCTGTGGTTTCTGTCCTCCTTGTGGGACAATTGCATGCAAACAATAATTCTGAACTAGTTTATCCTAGGCAAAGTACAACTTTCATAGCTTGCT GGACTCTGATTATTCATGTTGAAATGATTGAGGATGTAAGACCTTTCCAGAATGATTGGCCTCCTGAGGTTGTTTCCCATGGGCCATGGCCTTATACGAA CACCTGGACAAAGGAGACTTTGGTTAGCTAAAAATGCAAATGGATTCAAACTTCATGCTAATGTCAGTTTTCCTACTTGCATGATTTTTTTATATCATCT GAGTCATTTGATAAATGTTGCTTTTTGTTGAACTATTGTGTATTCACTTGCACCACAGAGAACCTGGAGCAGAAGAGAAATTCAAGGAAATCAGCAAATG CGTACGAGGTATTATCAGATGATGAGAAATGATCCATATTTGATAGATATTGAGAGGCTGGGCTTAAAGGTTCTGAAATGAACCCTGGGGATTTCAGCAA CCCTTTTGATCTGTTTGAGCAACTGTTTGACATGAATCGCGGCCCAGGCAGAGATCCTTATAATGGACCAGTTGACGGTGAAGATGAATATTACAGTCTT CTTTCGAACTTCAGGGAAGCAGTCTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGGTTAGAGAGCTGTGGAACATGCAAGTTGCAATGGTTCTGGGGCT AAACCAGGGACTACACCCACCAGATGTAGCCCTTGCGGTGGTCAAGGCCGGGTTGTCTCATCAACAAAACTCCACTAGGTGTCTTCCAGCAGCAAATGAC ATGCTCTTCATGTAATGGGACTGGAGAAATCTCAACACCTTGCAATACATGTTCTGGGGATGGTCGAGGGAGCAAAACAAAGCGGATAAGTGTGAAGGTC CCACCTAGTGTGGACTCTGGTAGTCGTTTGAGGGTCCGAAATAAAGGGAATGCTGGAAGGCGAGGGTGTTCTCCCTGTGACCTCTTTGCTGTGATTGAGG TTAACCCAGCACCTGCAAGGTGACATACATTGATGCAATCTTGAGGGCTACAATCAAGGTTCCTACTGTAGACGGGAATGGTGGATTTAAAAGTTCCAAG TGGGATCCAATCGAACACAACACTTGTTATGGCTAAGAAAGGTTTTCCTCTGCTGAGTAAAAACAATTTGAGGGCTGATCAATTGGTTCGTGTGCAGGTT GAAATCCCTAAAAGACTTAGCAGTGATGAGAGAAAGCTTATTGAGGAGCTTTCTTATTTAAGCAAAGACAAGACTGCCACCAGTAAGAGATAATACTGTG GTAACTTCTGTATCTGTCAATATATTTCTACCTTTCATGGATTATTTCTTGGTTATACACTTACTGAGGAGAATTTAGCTGCCATTTAACTCTGGATGGG TGAGAATGTGTTGGTGGCACTTGGTAGATGTGTAATATAATTTATTTGTCCTTATAAACATAGGCGGAGATGAAGTGCAAAAGAAATTAGAGATATTTTT TCTTCTTTGTAATATGGGTGGTGAATTCTTTTTATACTTCAGGTTTGATATCTATATTTCCTTAAATTAAGAAACATTAAAAAATTTGTAGGGCTGATAA TGAATCGAGCAAACTCGATATTCATTCCAAATTTGATTCGTTATTTAGCTCGGTAGATTTGGTTCATGAACAAAATGAGTCGAACTTGATAAATGTTGGT TCTTTGTCTCACTATTATGAGTGTTGGTTATTTGTCTC
• Tissue: pods
• Gene name: LI_gene_146766;
• Additional information: -

Expression of Ll_transcript_315546

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.1
• PS3: 0.4
• PW1: 0.3
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315546

• Blastp: -
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 58.31% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462097.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;