Ll_transcript_315535

• Id Trinity: TRINITY_DN46730_c1_g2_i4
• Name Transcript: Ll_transcript_315535
• Sequence: ATTGAATGCCCATTATATCTTTTGGCAGTACAATTGCTGCACAATGGGGTTTTATTGCTTGTATATGTACTGAAATTCTCAGAAACCAGAGTTCTATAAA TTTTTTTTATCAGAAACTAGGGTTTCTGTCCTATCTGTCATTAAATATTAAATCTTATGCAACATTGTACTCAATAAATAAACATAATTTTTCAGCATAC ACCCTTGTGCTGGAGAGTGTAATTTCTTGAATTCATATTCCTTGCAGTGTTACGAGCAGGGTAAGCTTTATGGCTGCCCCAAGTTCGAGCTTTCTTTCTC AGGTTTCCCTGCATCGTACACTATTAAATGCGAGTTCATCTCAAACATTGTTTCCTTATGGGTTTTGTTTATTTGAAATTTTTATATGATTGTAGTTAAT GAAAGAACTCCTCTTAATTTAAATTGTTTGACTCATGAATTACTCAATATAATACACTGAGTTTGTAATTTTTTATTGTTTGCGTGTGCAGGATTACTAT TCTGTCCTCGGGGTTTCAAAAAATGCTAAAAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCGGGAATTATCATCCAGATGTGAACAAATCATTAC CAATCAGATTCCTCGTCAATCTCCATTACCACATTTCAAATGACTTGACTAGTGACGTCTCAAGATTGGAGCATATGATATCTGTTATTTCTTAATATAT GCTCCAGGTGAAACATATTCTCAGAAGTGTACTTGTTGATGTAGATTGTGGGAATGCTATGCTTCTTTGGTTTCCTAAGAGGAAGGATAGTGGGTAAAGA TGATTTATCCTTGGGTAATTTTCTTAGCAATCTACCTACCATCTATCTCCCAATATTAGCAGTTTATCTTTGATTGTCATTAGAATATCTTAGAAGATCT CTTCTCATATATATATATAGGGCGTAACTCTAGTGAGAACAATTCTCATATTATCATATATATATATATATATATATATATATATAGGGAGTAACTCAAG TCACACAACCATACATGTAAGCTCAGGAACTTTAAGTGCTGTGGTTTCTGTCCTCCTTGTGGGACAATTGCATGCAAACAATAATTCTGAACTAGTTTAT CCTAGGCAAAGTACAACTTTCATAGCTTGCTGGACTCTGATTATTCATGTTGAAATGATTGAGGATGTAAGACCTTTCCAGAATGATTGGCCTCCTGAGG TTGTTTCCCATGGGCCATGGCCTTATACGAACACCTGGACAAAGGAGACTTTGGTTAGCTAAAAATGCAAATGGATTCAAACTTCATGCTAATAGAACCT GGAGCAGAAGAGAAATTCAAGGAAATCAGCAAATGCGTACGAGGTATTATCAGATGATGAGAAATGATCCATATTTGATAGATATTGAGAGGCTGGGCTT AAAGGTTCTGAAATGAACCCTGGGGATTTCAGCAACCCTTTTGATCTGTTTGAGCAACTGTTTGACATGAATCGCGGCCCAGGCAGAGATCCTTATAATG GACCAGTTGACGGTGAAGATGAATATTACAGTCTTCTTTCGAACTTCAGGGAAGCAGTCTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGGTTAGAGAG CTGTGGAACATGCAAGTTGCAATGGTTCTGGGGCTAAACCAGGGACTACACCCACCAGATGTAGCCCTTGCGGTGGTCAAGGCCGGGTTGTCTCATCAAC AAAACTCCACTAGGTGTCTTCCAGCAGCAAATGACATGCTCTTCATGTAATGGGACTGGAGAAATCTCAACACCTTGCAATACATGTTCTGGGGATGGTC GAGGGAGCAAAACAAAGCGGATAAGTGTGAAGGTCCCACCTAGTGTGGACTCTGGTAGTCGTTTGAGGGTCCGAAATAAAGGGAATGCTGGAAGGCGAGG GTGTTCTCCCTGTGACCTCTTTGCTGTGATTGAGGTTAACCCAGCACCTGCAAGGTGACATACATTGATGCAATCTTGAGGGCTACAATCAAGGTTCCTA CTGTAGACGGGAATGGTGGATTTAAAAGTTCCAAGTGGGATCCAATCGAACACAACACTTGTTATGGCTAAGAAAGGTTTTCCTCTGCTGAGTAAAAACA ATTTGAGGGCTGATCAATTGGTTCGTGTGCAGGTTGAAATCCCTAAAAGACTTAGCAGTGATGAGAGAAAGCTTATTGAGGAGCTTTCTTATTTAAGCAA AGACAAGACTGCCACCAGTAAGAGATAATACTGTGGTAACTTCTGTATCTGTCAATATATTTCTACCTTTCATGGATTATTTCTTGGTTATACACTTACT GAGGAGAATTTAGCTGCCATTTAACTCTGGATGGGTGAGAATGTGTTGGTGGCACTTGGTAGATGTGTAATATAATTTATTTGTCCTTATAAACATAGGC GGAGATGAAGTGCAAAAGAAATTAGAGATATTTTTTCTTCTTTGTAATATGGGTGGTGAATTCTTTTTATACTTCAGGTTTGATATCTATATTTCCTTAA ATTAAGAAACATTAAAAAATTTGTAGGGCTGATAATGAATCGAGCAAACTCGATATTCATTCCAAATTTGATTCGTTATTTAGCTCGGTAGATTTGGTTC ATGAACAAAATGAGTCGAACTTGATAAATGTTGGTTCTTTGTCTCACTATTATGAGTGTTGGTTATTTGTCTC
• Tissue: pods
• Gene name: LI_gene_146766;
• Additional information: -

Expression of Ll_transcript_315535

FPKM

• PAB: 0.1
• PNAB: 0.6
• PS1: 0.5
• PS2: 0.6
• PS3: 0.6
• PW1: 0.2
• PW2: 0.7
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315535

• Blastp: -
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 58.31% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462097.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;