Ll_transcript_315543

• Id Trinity: TRINITY_DN46730_c1_g3_i1
• Name Transcript: Ll_transcript_315543
• Sequence: ATCCACTATCATGGGTAGGGTTGCATCTTCCACTTCTACCCACAATGTTACAAGCAGGGTAAGCTTTATGGCTGCCCCAAGTTCAAGCTTTTTCTCTCGG GATTCCTTGCGTGGGCTATATGACATGGGTTCTTCTCAAACTTTGCATCGTCGCAGGGGGTCAAAGTTGATAGTTAGAGCAGAAGCTGATTACTATTCTG TTCTCGGAGTGTCAAAAAATGCTAGCAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGAACCTGGTGC AGAACAGAAGTTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAAAAGCGATCCATATATGACACATATGGAGAGGCTGGACTTAAAGGT TCAGCAGGAATGGGAGGCATGGGGGATTTCAACAATCCTTTTGATCTGTTTGAGACATTGTTCGAGGGGATGAATGGTGGGATGAACTCTAGAGGTTCTC CGAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGATT GGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGGACGAAGTCATCCAGATGTAGCACTTGCGGTGGTCAAGGTCGGGTTGTCTCACAAACA AGGACTCCACTGGGTATCTTTCAGCAGACTATGACCTGCTCTTCCTGCAATGGGAGAGGAGAAACTTCAACACCTTGCAATGCGTGCTCTGGTGATGGTC GAGTGAGAAGAACAAAGCGGATAAGTCTGAAGGTTCCAGCTGGAGTGGATTCTGGTAGCCGATTAAGGGTCCGAAATGAAGGTAATGCTGGGAAGCGTGG GGGTCCTTCTGGCGACCTCTTTGTTGTCCTTGAAGTTATCCCAGATCCTGTCCTTAAAAGAGACGATACCAACATTTTGTACACCTGTAAGGTGTCTTAC ATTGATGCAATCTTGGGGACTATAATTAAGGTTCCTACTGTAGACGGCACGGTCGACTTAAAAATCCCATCCGGGACTCAACCGGGTGCGACACTTGTTA TGGCGAGGAAAGGTATTCCGGTTCTCAACAAAAGCAACATGAGGGGTGATCAACTAGTTCGCGTGCAAGTTGAAATCCCTAAGAGGTTGAGCAGTGATGA GAAAGATCTTATTGAGAAACTTGCTGATTTAAGCAAAGGCAAAACTGCCACCAGTAGGAAATAAAATTTTGTGGAACATGTGTGTTCTTTCATGTATTTT TTTACCCTTACAAATATTCTTCTTTCATGGATACTTCATTCTTGACCATGACTCTGAGAAGTTGCCAGCATGTGTTGGTAGATGTAGGTTATTAGTTTTT ATTAGACACAGGTGGATATGAATAGCAGAAGAAACTAGGGATCTTTTTCTTCATTGGACTTGTATGTTATTTTTGTAGGAGTTATAATTTATACCTCAGG TGCATGCTTTCTCTATTTTATTAGATATGATTATTGGAGACAAAGTTGAGTTATATACACCCATTTATAATTTGTTGTTATAAATTAAAAGAATGACTTT CCC
• Tissue: pods
• Gene name: LI_gene_146767;
• Additional information: details;

Expression of Ll_transcript_315543

FPKM

• PAB: 27.4
• PNAB: 36.7
• PS1: 24.6
• PS2: 19.6
• PS3: 22.7
• PW1: 27.8
• PW2: 29.7
• PW3: 36.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315543

• Blastp: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 76.34% of identity
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 76.1% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414866.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;