Ll_transcript_315548

• Id Trinity: TRINITY_DN46730_c1_g3_i2
• Name Transcript: Ll_transcript_315548
• Sequence: AAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAGTGAGTTCCCCACTCATATTGAACATCTTTTACTTTCC AATACCGCTTCTTTGTCATGCCTGTCGCACTGTATTTTTTACTATTGCTGTTTACATGGTTTGGATGCTTAATTGTGATGCTTATATCGTCCATTCTAAA AATTGTTTTCCTACACCACCTCAACAACTTGTTAGCTTAAATCATTCGTCAAAGCGCCCCTTCACATGTCAGTTTTACTAGATGTATAATTTTCTTGTTT TCAAAATCATTTGATTAATATTGCATGTTGTTGAACTATTGTGTGTATTCACTCTATGCTGCAGAGAACCTGGTGCAGAACAGAAGTTTAAGGACATTAG CAATGCATATGAGGTAAAACTACTACTATTGAATGCAGCTTACCCTTGCTCATGTTTAACGGTAATTAGTCTCGAGTAATTTAAATTCTTTTGCAGGTCT TATCAGATGATGAAAAGCGATCCATATATGACACATATGGAGAGGCTGGACTTAAAGGTTCAGCAGGAATGGGAGGCATGGGGGATTTCAACAATCCTTT TGATCTGTTTGAGACATTGTTCGAGGGGATGAATGGTGGGATGAACTCTAGAGGTTCTCCGAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTT GTTTTGAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGATTGGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAG GGACGAAGTCATCCAGATGTAGCACTTGCGGTGGTCAAGGTCGGGTTGTCTCACAAACAAGGACTCCACTGGGTATCTTTCAGCAGACTATGACCTGCTC TTCCTGCAATGGGAGAGGAGAAACTTCAACACCTTGCAATGCGTGCTCTGGTGATGGTCGAGTGAGAAGAACAAAGCGGATAAGTCTGAAGGTTCCAGCT GGAGTGGATTCTGGTAGCCGATTAAGGGTCCGAAATGAAGGTAATGCTGGGAAGCGTGGGGGTCCTTCTGGCGACCTCTTTGTTGTCCTTGAAGTTATCC CAGATCCTGTCCTTAAAAGAGACGATACCAACATTTTGTACACCTGTAAGGTGTCTTACATTGATGCAATCTTGGGGACTATAATTAAGGTTCCTACTGT AGACGGCACGGTCGACTTAAAAATCCCATCCGGGACTCAACCGGGTGCGACACTTGTTATGGCGAGGAAAGGTATTCCGGTTCTCAACAAAAGCAACATG AGGGGTGATCAACTAGTTCGCGTGCAAGTTGAAATCCCTAAGAGGTTGAGCAGTGATGAGAAAGATCTTATTGAGAAACTTGCTGATTTAAGCAAAGGCA AAACTGCCACCAGTAGGAAATAAAATTTTGTGGAACATGTGTGTTCTTTCATGTATTTTTTTACCCTTACAAATATTCTTCTTTCATGGATACTTCATTC TTGACCATGACTCTGAGAAGTTGCCAGCATGTGTTGGTAGATGTAGGTTATTAGTTTTTATTAGACACAGGTGGATATGAATAGCAGAAGAAACTAGGGA TCTTTTTCTTCATTGGACTTGTATGTTATTTTTGTAGGAGTTATAATTTATACCTCAGGTGCATGCTTTCTCTATTTTATTAGATATGATTATTGGAGAC AAAGTTGAGTTATATACACCCATTTATAATTTGTTGTTATAAATTAAAAGAATGACTTTCCC
• Tissue: pods
• Gene name: LI_gene_146767;
• Additional information: details;

Expression of Ll_transcript_315548

FPKM

• PAB: 0.7
• PNAB: 0.2
• PS1: 0.6
• PS2: 0.4
• PS3: 0.2
• PW1: 0.3
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315548

• Blastp: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 80% of identity
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 79.15% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414866.1)
• Pfam: DnaJ C terminal domain (PF01556.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;