| Id Trinity | TRINITY_DN46734_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_315813 |
| Sequence | AAATCAGCCAATCTTATCCCCATAAAATTGTAAAATGCATTTTGGACAAAATTTATTATTATTATTTCAAATTTTTTTGAAGCTATCCATTACCCAAAAA AAAACACTGTATATATTGGAACATTTTGTGTGATAGGAAGACACAACAAGTATTGTAAAGTATGATTAAGGTATCAGCATCGTTGTTGTTTTGTTTTATG TTGGGGCTTTTGCTCCATTGTGAGGCTCATGAAAATAAACACAACAAGATTAGATTTTATGAACTAAAAAGAGGGAATATGCATCTCAATTTTACAAACT ATGGTGCTACCATTCTCTCTGTTAGGATCCCTGATAAACATGGGAAAATAGATGATGTTGTTCTTGGCTACGATACCATCAACTCTTATAAGAATGATAC ATCTTACTTTGGTGCTCTTATTGGACGTGTGGCAAATAGAATTGGAGGAGCTAAATTCATTTTGGATGGCAAAACTTACAAATTGCCTGCAAATGATCAC GGAAATACGCTCCACGGTGGTACCAGGGGATTCAGTGATGTTTTATGGAATGTAAAATCCCACAAGAAACACAGCCATGTAACATTTACATACCACAGTT TTGATGGTGAACAAGGCTTTCCGGGAAAACTCGATGTCTCCGTGACTTATATGTTCATTGGTAAAAACAAATTGGGAGTGAGAATGATTGCGAAACCGGT AGACAAAGCCACACCAGTGAATTTAGCACAGCATACTTACTGGAATCTGAGGGGCCATAACAGTGGTGACATTCTTTCTCACACAGTTCAGATTTTTGCA TCACAGATCACACCAGTTGACAGCAATCTTATCCCCACTGGCCGACTCCAATCTATTAAGGGCACGCCGTATGATTTCCTTGAACCAAAAGAAGTCGGAA GCCGAATTCACAAGCTTCCTGGTCTGTATGACATTAACTATGTGGTGGACAAAAGTCGGAAAACGCACTTCAACAAGGTGGCTATTGTGAAAGATCCAGT CTCCGGAAGGAAAATGGAGCTCTGGTCAAACCAAGTTGGTGTGCAGTACTATACTAGTGGCATGTTGGGTGATACCAAGGGCAAGGATGGGGCCGTTTAC CACAAGTATGCTGGCATTGCCTTGGAGACACAGGGTTTCCCGGATTCTGTGAACCACCCGAATTTCCCGTCCCAGATTGTGAAACCTGGGGAGATATACC AGCACTACATGATTTACAGATTCACAGCAAGCTAAATGGACTTGTAAAAGTTGCTGTGTATCTTGACAATTTGCTTCAGTTGATTTGAAATATTATTTCT TGCTTAGCTTAGCCTAGCTTAGCTTAGCTTTTTTCCTTTGGAGCTTACTTGAAATGATACGTTGCTGTTGCTGTTGCTATGAATAAGTTTTGAGGAAAGC TACTCAATGTTCAGGATTAACTCGTTTAGCACAATGATGTCTTCCTAGCTTTTATATATATTCACACACATGCATAAATTTCTTTCAATGAGAACAAGCA CGGTTGAAATTGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_146801; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315813
| Blastp | Aldose 1-epimerase from Rattus with 41.09% of identity |
|---|---|
| Blastx | Aldose 1-epimerase from Rattus with 41.46% of identity |
| Eggnog | converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose (By similarity)(COG2017) |
| Kegg | Link to kegg annotations (313843) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451266.1) |
| Pfam | Aldose 1-epimerase (PF01263.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |