Ll_transcript_316423

Id TrinityTRINITY_DN46737_c0_g1_i2
Name TranscriptLl_transcript_316423
SequenceATCCGAATTCTCTCACATACTAGGTATGCTGTTAATAACAAACTAATATTGATCCAAAGTTCCATACACATAAAAAAATTATTAAAAAATTATGTTATTC TTTTTTGTTTCTCCTGTAACCACCTAACTAACTTCCGAAGAAGGAAAAAAATGATTTGATAGCCTGAATCCCCCAACACGTTACACCGATCTGAGCCCAG TGGTGACAGATCACAGTCCTGCTACTTTCATTTTCAGCTCCGTAACCTCTCCACGTATTCCTCCTCCTCACTCTATGCATTATGTATCATCAACTTCAAC CCTATTCTCCCAGCGCACGTTAGCCCCCATCACTCTCTCCTTCTCTCTCTCTCTACCAAATCCCTAATCTTCTTCTCCCTCTTTAACAATGATGGGCTCT GAAAACCAGAGCTCCGATCAGCAACCACCACCAACCACTCATCAAATTGAAAACCACGATCCTTTAAGCCCTATCAATTCCTACTCCAATTACCGGAGCG TCATTTCCACGCTCTCCGATATCCACCACCCTTTCTCCGACCCCCTCCTCTCTCCTCCTTCCACCCAATCCCCAAACCCTAATGACGACAACAACAGCGA CATTTCCTCTTACGTCGACCTTCCCTCCTACAACGGCGCCGTTTTAACCCTCAACGGCGACTTCGACCTCGACAGCCCCACCGCGTCCTCCGAATCTTCT CAATCTGTCTCCAGATCTCTCTCTTCGAGCGCCGATTACTTAAAGGTAACCGTGTTAGACCCTGTCAAGGAGCAAGAAAGCTCTAATTCGCTTGTTCCTG GTAGCAATAGTTACGCTACGTATCTGATCACGACGAGGACGAATATTCCCGAATTCGGAGGGTCTGAATTTGGTGTCAGGAGAAGGTTTCGTGACGTGGT GACGCTTTCTGATCGGTTGGCGGAGTCGTACCGAGGGTTCTTCATTCCGCCGAGGCCGGATAAGAGCGTAGTGGAGAGCCAGGTGATGCAGAAGCAGGAT TTCGTGGAGCAGAGGAGGGTGGCATTGGAGAAGTATCTGAGGAGGCTCGCTGCGCATCCTGTGATTAAGAAGAGTGACGAGTTTAGGGTTTTTCTGCAGG CTCAGGGGAAGTTACCGTTGCCAACTACTATCGATGTGGCTTCGAGAGTTATGAATGGCGCGGCAAAGCTTCCAAAGCAGTTTCTAGGGGACAGTGTTAT TACTCCCCATGAGGTTGTGCAGCCTGCGAAAGGGGGAAGGGATTTGATGAGGCTGTTTAAGGAGTTGAAACAGTCTATGGTGAATGATTGGGGCGGGTCT AAGCCGACGGTTGTGGAGGAAGACAAGGAGTTCTCGGAAAGGAAGGAAAGCATTCAAGAGCTTGAGCAGCACATCACTAATGCATCTCAGCAGGCAGAAT CACTTGTGAAAGCTCAGCAGGCTATGGGAGAAACCATGGGTGAATTAGGATTGGCATTTATTAAATTGACAAAATTTGAGAATGAGCAGGCTGTCTGGAA CTCTCAGAGGGTTAGAGCTGCTGACATGAAAGGTGTAGCAACAGCTGCTGTCAGAGCTAGCAGATTATTTCGAGGACTAAATGCAGAGACTGTGAAGCAT TTGGATACACTTCACGAATATCTCGGACTAATGTTGGCTGTCCATGGTGCATTCTCGGATCGCTCAAGTGCGCTATTGACAGTGCAAACCCTTCTATCAG AACTATCTTCTCTGCAGTTAAGAGCTGAAAAACTTGAAGCAGCATCTTCTAAAGTTTTTGGGGCTGACAAATCAAGGATTCGTAAATTAGAGGAGCTAAA AGAAACCATAAAAGTCACTGAAGATGCTAAAAATGTTGCAATTAGAGAATATGAGCGGATCAAGGAAAACAATAGGAGTGAAATTGAAAGGCTTGATAGA GAGAGGCAGGATGACTTCTTAAACATGTTGAAAGGATTCGTAGTTAGTCAGGTTTGATTTTTGTCTATGACTCTATTCTTTTTAATTGTCTTCTTTAGTA GTCGACTGATCTGTATTTTCCTTTGATAGTCTCCACTCCCCATATGTAAACACTTTCTATTCTATGCATAATCTCTAATGAGTGAGGTTAATCCAGAAGT AGCTCTGCTGGTGTTAGTGTGAGCCATGGTTGTTTGACCAAGAAAATTGCAATTATAGTAGAGAGGACTTTATGTTTACAATGTCAGGGACACATGATGA ATGAGAAAATAAGAATGAGTAGTCATCTTATTAGAACTAGAATTTTCACTGAGGCCATGAAAAAATGGGACATTCTCATTTGTATCAAGCAAAACTTCTG GAGTAATTACCACCAATACATAAAAGCTGGAGTAGAGATAGTTGTATGGTATAGACTGAGAGTCATGAAACAAAATGATGAACTGAATACATTTTTAATG AGAAAATAGTTGAGGTTTTACTTGTGAAGGAAACATGTGTTCTAACTGCTAAAGTATCATTCCATCGAGTAAAAAAAACTGCTAAAGTATCATTATTGCA AAGGGATTAGACAATGTGTCATATTGTCCTATTCCTCTTTAGATAATGAGCAGAATAGCCTCCTTTCACATTACAGTCAATAACTATTCCTCTTGCAAAT CTGACATGTTGATTTCTGTAAGATTTTTGCAACCGTAGTCATATATGGTGTATGGTGAAGTTTTTCTTTCTTCCAAATGGGAAAAAGAAATACAGTCATG TGCGCAGTGCATGCAGCATTGACAATTCTTTCATTATTACACATATATGCCCCGAGAAAGGAAGTTGATTGTAACTTTTGAAGGTAAAATGGTTACTAGG TGTAATTAAGCTGAACCCCAAGGGAAGTTAATGTGATTTTCCCTAACATTACTGAGAATGGAAAAGCTGCCTATTTCAGTAATCTTTGGTTAATTTTGCT CCTCATCTGCACGTTTTGTTGATGCTATCTTTAGTTGCATTCATCATTTGCTTTGTGCCCAAGTAAGTAATACTCGTTGTGAATTAATAGGTGGGGCATG CTGAGAAAATAGCAAATGTCTGGACAAATGTTGTTGAAGAGACCCGTGCATATGTGAATGAAAGCACTTTATCAGTGTCGGCTACAAATTTTTAAATTTT CATCTCCTTTATTCATTGATGTGCCTCAGAATATATTTGTAGTCATGACTCATGACAATAAACTCAAGGAAGCACTTTATCGTTTTCTAAGTTTTCTCAC ACACCTGTAATCTTCTAACATTTCTTACACATCATTAAAACTCGTACTTGTAGTCATGACTCATGACAATAAACTCAAGGAAGCACTTTATCGTTTTCTA AGTTTTCTCACACACCTGTAATCTTCTAACATTTCTTACACATCATTAAAACTCGTACTTGTAGTCATGACTCATGACAATAAACTCAAGGAAGCACTTT GTTGGTTTCTAAGTTCTTTCTCACACTTGTACCTCTTCTAACATTTCTTACACATCATTAAAACTCATACTTGATGTTGTAAATTATTTGCTCTATATTC TACTCCAGGTTTTGGAAGATTTGCTTGTTTTTTCCCTTTTCAGATGTCTAACTACTAATCATATACTT BLAST
Tissuepods
Gene nameLI_gene_146814; 
Additional informationdetails; 

Expression of Ll_transcript_316423

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_316423

BlastpSorting nexin 2B from Arabidopsis with 65.09% of identity
BlastxSorting nexin 2B from Arabidopsis with 63.88% of identity
Eggnogsorting nexin(COG5391)
KeggLink to kegg annotations (AT5G07120)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019461500.1)
PfamPX domain (PF00787.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;