Ll_transcript_316424

• Id Trinity: TRINITY_DN46737_c0_g1_i3
• Name Transcript: Ll_transcript_316424
• Sequence: ACATCTAATTCACTTGTTCCTGGTAGCAATAGTTATGTTACGTATCTGATCACGACGAGGACGAATGTTTCCGAATTTGGAGGATCTGAATTTAGTGTTC GGAGGAGGTTTCGTGATGTCGTCACACTTTCGGATCGTTTGGCGGAGTCGTACCGAGGGTTCTTCATTCCGCCGAGGCCGGATAAGAGCATAGTGGAGAG CCAGGTTATGCAGAAGCAGGAGTTCGTGGAGCAGAGGAGGTTGGCGCTGGAGAAGTATCTCCGGAGGCTTGCCACGCATCCGGTGATCAGCAAGAGTGAT GAGTTTAGAGTTTTTCTGCAGGTTCAGGGGAAGCTCCCGCTGCCAGCCACGACTGATGTGGCATCGAGAGTTTTGGATGGCGCAGCGAAGCTCCCGAAGC AGTTGTTGGGGGACAGTGTGATTGCACCCTATGAGGTTGTGCAGCCGGCAAAGGGGGGAATGGATTTGATGAGGCTGTTTAAGGAATTGAAGCAGTCTGT GGTGAATGATTGGGGAGGTTCTAAGCCGGCGGTTGTGGAGGAAGATAAGGAGTTCTTGCAAAAGAAGGAAAGCATTGAAGAGATTGAGCAGAACATCAAT AATGCATCTCAACAGGCCGAATCACTTGTCAAAGCCCAGCAAGATATGGGAGAAACCATGGGTGAATTAGGTTTGGCATTTATTAAGTTGACAAAATTTG AAAATGAGCAGTCTGTCTTGAATTCTCAGAGGGTTAGAGCTGCTGACATGAAAGGTGTAGCAACAGCTGCTGTCAGAGCTAGCAGATTATTTCGAGAACT AAATGCGCAAACTGTGAAGCATTTGGATACACTCCACGAATATCTTGGACTTATGTTGGCTGTCCATGGCGCATTCTCAGACCGCACAAGTGCGCTATTG ACAGTGCAGACCCTTCTATCAGAACTATCTTCTTTGCAGTCACGAGCGGAAAAACTTGAAGCAGCATCTTCTAAAATTTTTGGGGGTGACAAATCTAGGA TCCGTAAATTAGAGGAGCTAAAAGAAACCATAAAAGTCACTGAAGATGCTAAAAATGTTGCAATTAGAGAATATGAGCGGATCAAGGAAAACAATAGGAG TGAACTTGAAAGGCTTGATAGAGAGAGACATGATGACTTCTTAAACATGTTGAAAGGATTCGTAGTTAATCAGGTGGGGTATGCTGAGAAAATAGCAAAT GTCTGGACAAATGTTGTTGAAGAGACCCGTGGATATGTGAATGAAAGCACTTGATTACGGTGGCGGTAAATTTAAAATTTTATCTTTATTCATTAACGTG CCTCCCTCAGAATGCATGTTTGTAGTGATGACAATAAACTTGATGAAGTGCGATGTTGGTTTCTAGGTTCTCTCTCACACTTGGTGGTTTCTTACATATC ATTAAAACTCATACTTATGTTGTAAATTATTTGCTCGATGTTTTACTCCTCCGGGTTTTGAAGATTTTGTTTCTGTTTGCTTTTCCTTTTTCACTTGTCT AACTACTGATCATATACTTGACCCAACAAAAAATACCCGTCATATGAAGTTGTGTAACCGAGTTTCAACTATTTTCTCCCATATCAAAATTTACTTTGTA AAATAGTTTTGAACAACTTGCTCACAAAAACCGAAAAAGGAAATTATGATAAACCTCTATTGTATCAAATTGAGAATGTTGTGTACTAAAAAAACCTCAG TGTATCACAAAAATTGAGAATGTTTTACGCATCTTTTTTAATAAGTTGTGCTCAATAAACGTCACCCATTTCCCAGGATCCTCTACCCAGCCAGGAATTT AATTTTAGGCAGTAGGGGTAAGTTTAATGTGGGTGAGTAGTTGTGTTGGAAATTCGAGTAGATGAGGTATAGTCCGATTCTATAGATTCATGGGAAATGC CACTGACTTTTATGTAGCTGGCCAAGACACAAGGTAAAAGGAG
• Tissue: pods
• Gene name: LI_gene_146814;
• Additional information: details;

Expression of Ll_transcript_316424

FPKM

• PAB: 15.8
• PNAB: 12.8
• PS1: 15.7
• PS2: 12.5
• PS3: 14.1
• PW1: 12.6
• PW2: 15.3
• PW3: 14

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_316424

• Blastp: Sorting nexin 2B from Arabidopsis with 78.66% of identity
• Blastx: Sorting nexin 2B from Arabidopsis with 78.66% of identity
• Eggnog: sorting nexin(COG5391)
• Kegg: Link to kegg annotations (AT5G07120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456404.1)
• Pfam: PX domain (PF00787.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;