Ll_transcript_316430

• Id Trinity: TRINITY_DN46737_c0_g1_i8
• Name Transcript: Ll_transcript_316430
• Sequence: ATCCGAATTCTCTCACATACTAGGTATGCTGTTAATAACAAACTAATATTGATCCAAAGTTCCATACACATAAAAAAATTATTAAAAAATTATGTTATTC TTTTTTGTTTCTCCTGTAACCACCTAACTAACTTCCGAAGAAGGAAAAAAATGATTTGATAGCCTGAATCCCCCAACACGTTACACCGATCTGAGCCCAG TGGTGACAGATCACAGTCCTGCTACTTTCATTTTCAGCTCCGTAACCTCTCCACGTATTCCTCCTCCTCACTCTATGCATTATGTATCATCAACTTCAAC CCTATTCTCCCAGCGCACGTTAGCCCCCATCACTCTCTCCTTCTCTCTCTCTCTACCAAATCCCTAATCTTCTTCTCCCTCTTTAACAATGATGGGCTCT GAAAACCAGAGCTCCGATCAGCAACCACCACCAACCACTCATCAAATTGAAAACCACGATCCTTTAAGCCCTATCAATTCCTACTCCAATTACCGGAGCG TCATTTCCACGCTCTCCGATATCCACCACCCTTTCTCCGACCCCCTCCTCTCTCCTCCTTCCACCCAATCCCCAAACCCTAATGACGACAACAACAGCGA CATTTCCTCTTACGTCGACCTTCCCTCCTACAACGGCGCCGTTTTAACCCTCAACGGCGACTTCGACCTCGACAGCCCCACCGCGTCCTCCGAATCTTCT CAATCTGTCTCCAGATCTCTCTCTTCGAGCGCCGATTACTTAAAGGTAACCGTGTTAGACCCTGTCAAGGAGCAAGAAAGCTCTAATTCGCTTGTTCCTG GTAGCAATAGTTACGCTACGTATCTGATCACGACGAGGACGAATATTCCCGAATTCGGAGGGTCTGAATTTGGTGTCAGGAGAAGGTTTCGTGACGTGGT GACGCTTTCTGATCGGTTGGCGGAGTCGTACCGAGGGTTCTTCATTCCGCCGAGGCCGGATAAGAGCGTAGTGGAGAGCCAGGTGATGCAGAAGCAGGAT TTCGTGGAGCAGAGGAGGGTGGCATTGGAGAAGTATCTGAGGAGGCTCGCTGCGCATCCTGTGATTAAGAAGAGTGACGAGTTTAGGGTTTTTCTGCAGG CTCAGGGGAAGTTACCGTTGCCAACTACTATCGATGTGGCTTCGAGAGTTATGAATGGCGCGGCAAAGCTTCCAAAGCAGTTTCTAGGGGACAGTGTTAT TACTCCCCATGAGGTTGTGCAGCCTGCGAAAGGGGGAAGGGATTTGATGAGGCTGTTTAAGGAGTTGAAACAGTCTATGGTGAATGATTGGGGCGGGTCT AAGCCGACGGTTGTGGAGGAAGACAAGGAGTTCTCGGAAAGGAAGGAAAGCATTCAAGAGCTTGAGCAGCACATCACTAATGCATCTCAGCAGGCAGAAT CACTTGTGAAAGCTCAGCAGGCTATGGGAGAAACCATGGGTGAATTAGGATTGGCATTTATTAAATTGACAAAATTTGAGAATGAGCAGGCTGTCTGGAA CTCTCAGAGGGTTAGAGCTGCTGACATGAAAGGTGTAGCAACAGCTGCTGTCAGAGCTAGCAGATTATTTCGAGGACTAAATGCAGAGACTGTGAAGCAT TTGGATACACTTCACGAATATCTCGGACTAATGTTGGCTGTCCATGGTGCATTCTCGGATCGCTCAAGTGCGCTATTGACAGTGCAAACCCTTCTATCAG AACTATCTTCTCTGCAGTTAAGAGCTGAAAAACTTGAAGCAGCATCTTCTAAAGTTTTTGGGGCTGACAAATCAAGGATTCGTAAATTAGAGGAGCTAAA AGAAACCATAAAAGTCACTGAAGATGCTAAAAATGTTGCAATTAGAGAATATGAGCGGATCAAGGAAAACAATAGGAGTGAAATTGAAAGGCTTGATAGA GAGAGGCAGGATGACTTCTTAAACATGTTGAAAGGATTCGTAGTTAGTCAGGTGGGGCATGCTGAGAAAATAGCAAATGTCTGGACAAATGTTGTTGAAG AGACCCGTGCATATGTGAATGAAAGCACTTTATCAGTGTCGGCTACAAATTTTTAAATTTTCATCTCCTTTATTCATTGATGTGCCTCAGAATATATTTG TAGTCATGACTCATGACAATAAACTCAAGGAAGCACTTTATCGTTTTCTAAGTTTTCTCACACACCTGTAATCTTCTAACATTTCTTACACATCATTAAA ACTCGTACTTGTAGTCATGACTCATGACAATAAACTCAAGGAAGCACTTTATCGTTTTCTAAGTTTTCTCACACACCTGTAATCTTCTAACATTTCTTAC ACATCATTAAAACTCGTACTTGTAGTCATGACTCATGACAATAAACTCAAGGAAGCACTTTGTTGGTTTCTAAGTTCTTTCTCACACTTGTACCTCTTCT AACATTTCTTACACATCATTAAAACTCATACTTGATGTTGTAAATTATTTGCTCTATATTCTACTCCAGGTTTTGGAAGATTTGCTTGTTTTTTCCCTTT TCAGATGTCTAACTACTAATCATATACTT
• Tissue: pods
• Gene name: LI_gene_146814;
• Additional information: details;

Expression of Ll_transcript_316430

FPKM

• PAB: 9.5
• PNAB: 14.1
• PS1: 13.5
• PS2: 14.6
• PS3: 13.8
• PW1: 12.1
• PW2: 12.9
• PW3: 11

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_316430

• Blastp: Sorting nexin 2B from Arabidopsis with 65.39% of identity
• Blastx: Sorting nexin 2B from Arabidopsis with 64.24% of identity
• Eggnog: sorting nexin(COG5391)
• Kegg: Link to kegg annotations (AT5G07120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461499.1)
• Pfam: PX domain (PF00787.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;