| Id Trinity | TRINITY_DN46741_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_315712 |
| Sequence | TTGGACATAAGCAAAGGGGCAAGGTGTGTGTTTTGGTTTGCTGTATAGATACTGTCCTCTCATATGTTCTGGTTGTTCTTGCAATTTCTGAATCTTAATA CCATGTTTGTTCTCTAATTCATGTTTATTATTAACGGTTTAGTTTTACAATCCCTCACATGCTTTGATTATTTTAGAGTAGGGGAAAATAAAACTATTTC TAGCACTGCTCAACCTTCTCTATAATTCTCAGTCTTTTTATTTCATCTGTTCTATTGTCTTAATTTGCAACTTTATTATCTTTAGTTGCCTGTATTTTGG CATGTAAAATTGTGCAATCATTCTCATTGATAAGATTTTGACCACCGTAGTTTTGTAGTGAGCAGACCTGCTAGTGTTATATTATTTATTAAATTTTTGC CCAAAACTTGTGCAAATTTCATCTTATGCATTTAAACATAGATTGACAGTAGTGAGACTCTTGGCCTATATGATTAGGTCAATAAGTATGTTCTCGACCA ATGTGCTAACTTTACCTACATTTATATTTGTTCTGTTGTGTTCCTAATATCTATTTTTTCCTGTACTCTGGACAGCCCGCTGAGGAATCAGTGAATGTGT TCTATCATTATACATACGAGGGGAGTGTGGACATAGATTCAGTTTCAGATCCTGCAATGAAAGCATCCATTTTAGCACAAATTAATCATTTTGGGCAGAC ACCAAAACAACTGTTCCTGAAGCCCCATGTGAAAAGGCGAACTGACAGAAAGCTTCCTCCTCACCTGCTTAAACATTCCACTCATCTTGTTTCACATGAG ATACGCAAAAGTTCTTCACCTATCTCTCAAATTGTTACTCTCAATGATAATAAAGTTCTCATAGCAGGAAGTAACAATTTGCTTAAACCCACGACATATA CTAAATATGTCGCATGGGGTTTCCCTGATCGTAGCTTGAGATTTATGAGCTATGATCAAGACAGACTTCTTTCGACGCATGAAAATTTACACGGAGGTAA TCAGATTCAGTGTGCTGGTGTTAGCCATGACGGTCAGATTCTGGTTACCGGTGCTGATGATGGCCTAGTTAATGTTTGGAGAATCAGTATGTTTGGGCCC CGTGCCTTACGGCGCTTGAAGTTGGAGAAGCCACTTTTTGCACACACAGCCAGAATCACATGCATTAAAGTTAGCCAACCTTTCATGCTTATTGTGAGTG GATCAGATGATTGCACAGTTATTATATGGGATCTCAGCTCCATGTCATTTGTTCGGCAGCTCCCGGAATTTCCGGCACCTGTTTCCGCGATTTTCGTTAA TGATTTGACTGGAGAGATTGTTACTGCTTCCAGCATTCTTCTGGCAGTTTGGAGCATCAATGGTGATTGCCTGGCAATGATCAATGCGTCCCAACTTCCA TCTGATTCGATTCTCTCGGTTACGAGCTGTACATTTTCGGACTGGTTGGACACAAGGTGGTATGCAACAGGTCATCAGAGTGGTGCTGTCAAGGTGTGGC AAATGGTTCATTCCTCTGACAAAGATAGCTCCCTTAGTAGACCAGTTTCAAATTTAGGTGCAAAAGAACCAGAATACAGGTTGGTCCTACACAAAGTACT CAAGTCCCATAAACATCCAGTTACTGCCCTTCACCTCACTGGTGACATGAAACAGTTATTGAGTGGGGATAGTGGTGGGCATTTACTTTCTTGGACACTA CCTAATGAGAGTATGAGAGTTTCATTCAATAAGAAGGGGTGAAAATGGAAATAACAATTCTTTGTGCTGACTTAGCTTTTTATTGCTTTTAATTCTTAAA TTCTAACCTTCAATTGGAGAGATTATTGCTAGGTATGGTGCCATTTAGTATTGGCCAATAGTAACATGACACCTGACAATTACGGACCTCTGTTACCTAG GCTTGGTGCCTTATTACTATTGGTGGAATCACATGGTCCTGAATCATGCAATAAATTCTCGATTTGGTTGAGTACTTGAGTGGATCCCAATTTGTCTAAA GAGAGACTCGTGTTCAGAGTCTATTGAAAAATTGCAAGAAAGCTTGCCACAGATTGGGACAAGGTTGACAAAGAAAAGAAGAGACCACAAGCACATAGAA GGCTAAGAAGATCTACATTCAAGAGGAGAGTGGCATGTGATGCATGTGTTCAAGAGGGGGAAAAGAGAAAGCAGAAAATGTTGGGCCCAGGTATTTTGAT TTTGTATCTTTGATGTAAATATATGAAGCAGCTTAGTATGTAATTAAGTTTGTATAGTGAAATGATGGGTATGGGATGTGCCCATCTTATCTCTTTAGTG TTAACCAAGAGTATCTATCTACCTATAGGAACTAATCATTTTTTGGTTGCACCATCCCATAAAGCAAGTGTGCTTATAGGAATCGAACCTTGACATTTGA TGCATTTATTTGCTTACTCTTGACCAACAAAATCATTTTTTTTGTTTTTTATTAAAAATATGAATAACGTGGAATGTAGATACAGTCAAGAGTGTTAATA ACAACACTCCTATGAATGCATGTGGGATTTTGCTTTTGCTTATCAGATAAGTGTAATCTTTCTCTCATCGGAATCAATCTCTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_146830; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315712
| Blastp | Protein SPIRRIG from Arabidopsis with 72.68% of identity |
|---|---|
| Blastx | Protein SPIRRIG from Arabidopsis with 72.14% of identity |
| Eggnog | beige BEACH domain containing protein(ENOG410XNQC) |
| Kegg | Link to kegg annotations (AT1G03060) |
| CantataDB | Link to cantataDB annotations (CNT0002534) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455527.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |