| Id Trinity | TRINITY_DN46742_c1_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_315292 |
| Sequence | CCGAAACTGCAGCAACCGCATAAACTGCTTATCTGTTACCCAATTTCACACTTCTTTTGTCATTTCGTTTTTATTTGAGATTAGTTTTTTCTTCTTCACC TCTTTCTTTCTTCTTCTTTGAATGGGTATAGTTCTATGGTGGTGCCAAAAATGTTTCATTGAAGCAAACTACAATGGATGATGATAGATCTTTCCGGTGG CAGTGACACCATATTGGGCAAAGTGATACCATTGAAATCTACTATGGTGGTAGAATTGGAGAGGTGAAAAGGGTTACCAAGGAGACCAATGTATCAGTGA AAATAAACTTGGATGGTTCTGGTGTTGCTGATAGTAGTACTGGAATTCCATTCCTTGATCATATGCTAGATGTTAGTTTTTGAATTCTATTGTAGTACCT CATTGTTGGTGATGCTTTAAATATTTATTTGCTTTGTTTTCTTGTTGTTTTCCACCTTTGCTATCTTTTTCATTTGGAGTTCTTGCTACAATTGAATGAA AAGGTTGGAAATTTGGAACAAGAGATGAAAGGGGCTGGGCTGATGTTGGATGAATAATGGAGTTGTCTATAAGAGAATGTGCCGCTTCGGAAATATCTGA ATTGTTAGAATGTGATCATAAATCATGATGCTCTTTGTTTTGGGCTTTCTAACTTGAAAACTAAAAGCTAAGGGTGTTGGGGATTTAGAAGTGTAAATTG GGCATTAAAGTTATGAAAAATTGTTTTTTTGTGATTTTTCAGCAAATTGCTTCACATGGGGTGTTCGATGTGCATGTTAAGGCTACAGGTGACATACATA TCGATGATCATCACACGAATGAAGATGTTGCTCTTGCTATTGGAACGGCTTTGCTGCAGGCTCTTGGTGATAGGAAGGGTATTAACCGGTTTGGTGACTT CTCTGCTTCACTCGATGAAGCATTAATACATGTTTCACTGGATTTATCTGGCCGACCGTATCTAGGTTATAATTTGGACATACCTACTCAGAGAGTTGGG ACATATGACACTCAGTTGGTGGAACATTTTTTCCAGTCTTTAGTGAATACCTCTGGTATGACACTTCACATTCGGCAGGATATATATGCATTACTTTGAG CACAGCTTGCTGGAGCAAATTCCCATCATATTATTGAGGCAACCTTCAAAGCTTTTGCTAGGGCTCTTCGACAAGCAACAGAGTACGATCCACGTCGTCG TGGAACTGTGCCAAGTTCAAAAGGGGTCCTCTCACGTAGTTAATAACTTCGGCTTGTATGCATAATCGGATTGAGCTACCAATGTGGACCTCCATAACAA TTCAAGCATATGCATCCAAAAAGATCCCTGACTCTAATAAATGCAGGTTTCTTGGTCTGTAAACAATATTGTTGTACTTACATTCATTCTGGATGATAGA AATAATATTATTGTTCTAGTGCTTTTCTTTTCGGTTAAAAAATATGTAAGTGGAATATGCTTTCTTGTTTATTGTTGTACTGGTCAGATTGTCATCTGTT GATTTTTATCAGAATATGGAATGCATGTTGTGCTGGATGGAACATACACTATTTTCTTTGCACGTGTGTTTCTATCCATCTTCCCCATTACATGCATATA TTTACC BLAST |
| Tissue | pods |
| Gene name | LI_gene_146845; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_315292
| Blastp | Imidazoleglycerol-phosphate dehydratase 1, chloroplastic from Arabidopsis with 88.7% of identity |
|---|---|
| Blastx | Imidazoleglycerol-phosphate dehydratase from Pisum with 86.39% of identity |
| Eggnog | imidazoleglycerolphosphate dehydratase(COG0131) |
| Kegg | Link to kegg annotations (AT3G22425) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020966884.1) |
| Pfam | Imidazoleglycerol-phosphate dehydratase (PF00475.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |