Ll_transcript_314887

• Id Trinity: TRINITY_DN46744_c6_g5_i2
• Name Transcript: Ll_transcript_314887
• Sequence: CAGATTCATTGTGTCGTCTAGGTTCCATGAGATTTGATTAGTAAAACATAGATTGATAAAAAAAAACAAGATAAAACAACATAAGATGCTACAAATGTAA CACAAACATTAGATCATGGCATTAACAACAGCATCAACATTAGAGTTTCTAAGCAAGAAGCCTTATACTCCTCCTTCATGGGCATCTCATCTCAACCCTC TTCCTTCTCATGTCTTCTCTCTTGCCCATCTTCCTACTCCAATTCACAAATGGAACCTTCCCAACTTGCCTCCCAATACTCACATCTATCTCAAGCGTGA TGACCTTTCAGGAATGCAATTGAGTGGAAATAAAGTTAGGAAATTGGAATTTTTGATGGCTGATGCTGTGGCTGAAGGGGCAGACTGTATCATCACAATT GGAGGCATTCAGAGCAACCATTGTCGCGCTACTGCGGTTGCTGCTAAGTATTTGAATCTTGACTGTTATCTTATACTCCGCACTTCTAAGGCTCTGGTGG ACCAAGATCCAGGATTGACAGGCAATCTCCTGGTTGAACGTTTGGTTGGAGCTCATGTTCAACTTATTTCCAAAGAAGAGTATGCAAAAATTGGAAGTGT GACACTTACCGAAGTCCTAAAAGAAAGGTTGATAAAGGAAGGGAGGAGGCCATATGTTATTCCTGTTGGTGGATCAAACTCTTTGGGAACATGGGGTTAT ATAGAGGCAATTCGAGAAATTGAGCAGCAGATTGAAAGTGAGACAAGCAATGTCAAGTTTGATGATATTGTTGTAGCTTGTGGAAGTGGGGGCACAATTG CTGGTCTGTCACTAGGATCTTCATTGAGTACATTGAAAGCAAGAGTACATGCATTCTCTGTTTGTGATGACCCAGATTACTTCCATGACTATATTCAAGG CTTGCTTGATGGACTAAATGCTGGTGTTAACTCCAGAGATATTGTCCACATACTAAATGCCAAGGGTCTTGGCTATGCATTGAACACATCTGAGGAGCTT AGTTTTGTAAGAGAAATTGCTGCAACTACTGGTGTTGTTCTTGACCCTGTTTACAGTGGAAAAGCTGCATATGGATTGGTGAAAGATATATCTGAAAATC CAAAGAAGTGGGAAGGGAGAAAGATCTTGTTCATACACACAGGTGGTCTCCTAGGATTGTTTGACAAGGTTGATCAGATAGCTCCTTTAGTCGGAAAATG GCATCGAATGGATGTTAATGAATCTGTTCCTAGGCAAGATGGTATTGGAAAGATGTTCTAATGAAGGAAAATGAAAAACTTGGCATTGCTTGCATCTAAG TTTCTTAGTATATTGCTCCAAATAAATTGTATTTTATAACAATGCACATGTTGCACCCTGGAGTTATCATATGATAATGAAGAAATTCAATAATAAAGTC ACAACACAACGGGTGGTGAAAATTGTTTGTTGTCACTTGTGCTTGTTTTGGATTGGGATATGTCATGTTTGTGTTTGGAAAAGTTTTTTAGTGCTTTTAA GTTATTCTTTTTCAATATGAGTGCTTAAGTAATTTTAAGTAGGAGATGGTGACATGATAGAAGCTATTCAGTATAGTTATTGAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_146865;
• Additional information: details;

Expression of Ll_transcript_314887

FPKM

• PAB: 28.1
• PNAB: 32.5
• PS1: 36.2
• PS2: 23.2
• PS3: 36
• PW1: 32.5
• PW2: 36.9
• PW3: 28.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_314887

• Blastp: Putative D-cysteine desulfhydrase 1, mitochondrial from Oryza sativa with 76.28% of identity
• Blastx: Putative D-cysteine desulfhydrase 1, mitochondrial from Oryza sativa with 73.39% of identity
• Eggnog: 1-aminocyclopropane-1-carboxylate deaminase(COG2515)
• Kegg: Link to kegg annotations (4330881)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422103.1)
• Pfam: Pyridoxal-phosphate dependent enzyme (PF00291.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;