Ll_transcript_315838

• Id Trinity: TRINITY_DN46747_c1_g2_i1
• Name Transcript: Ll_transcript_315838
• Sequence: GAAATGATAAAAGTGCTTGTTGCTGAGCGCCACTCTTGTGTACGAACACTTGGAAGTTCAAACCCTAAAGTACAATTATTTGAGAGTAGGAAGTGTAACT CGTGTTCGTGGAAATGGAAGTCAAAAAGCAACGTTGTTATCACAAACCCAACACTGTTAATAATGGAATCTTGTTCCGACATGCAAGAACTGAAGCAGAT TCAAGGTCACATGACCGTAACTGGACTCATTTCCCACACTTACCCCGTGAGTCGTGTCTTAGCGTTTTGTGCCCTTTCCAACAAAGGAGACTTTAACCAT GCTCGTCTTCTCTTCCATAACATTCATAATCCCAACACTTACATTTGGAACACCATGATCAGAGGCTCTCTTCATTCCAACATTCCCACCATTGCTTTCT CCTTCTTCCTTCATATGATTCGACTCCATGCTCCAATGGATTGCAGGACCTTCGTCTTTGCCCTCAAGGCCTGCCACAACTTTAAGGGTGTCTCACAGGG GGAATCTCTGCATTCTGTCCTTCTTAAAATGGGTTTTCATTCCGAGTTGCTTCTCCTTAATGGCTTGATCCACTTCTATGCTGCTCACCCTCGATCATTG AATAATGCACGCAAGGTGTTTGATCAATGTTCTCACAAGGATGTTGTTACTTGGACCACAATGATTGATGGCTATGCAGCCCTCCATTGTTCCGATGCGG CTATGGAGCTATTCAATTTGATGTTGATGACTGGTGTTGAGCCCAATGAGGTGACTTTCATTGCAGTGCTAAAGGCATGCTCTCAAAAGGGTGACCTTCA AATGGGGAAAAGTATTCATGAAAACATAGAAAAGAGTAGCAAGAGTATGAGGTGCAGCTTAAGTTTGCATAATGCCTTGTTGGACATGTATGTAAAATGT GGTTGTTTGACGAGTGCAGTTGAGCTTTTTGACAGAATGGAAACTAGGGATGTTTACTCATGGACTAGCCTGGTCAATGGCTATGCTAAATGTGGTGACT TAGAATCTGCTAGGTCATTTTTTGATCGAACTCCACAAAAAAATGCAGTCTCGTGGAGTGCAATGATCGCAGGGTATTCTCAGAATAACAAACCTAAGGA ATCTTTGAAGTTGTTTCATGAAATGATTGGGGCAGCTATGGTTATGGTGGAGCACACCTTAGTAAGTGTGCTCTCTGCTTGTGGTCAGTTGAGTTACTTG AGTTTGGGTCATTGGATTTATGAATATTTTGTGAATGGAAAAAGAATGCACCTTAGTGTTACTCTGGGAAACGCGGTTATAGATATGTATGCAAAATGTG
• Tissue: pods
• Gene name: LI_gene_146883;
• Additional information: details;

Expression of Ll_transcript_315838

FPKM

• PAB: 0.1
• PNAB: 1
• PS1: 1.5
• PS2: 0.7
• PS3: 1
• PW1: 0.6
• PW2: 0.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315838

• Blastp: Pentatricopeptide repeat-containing protein At2g29760, chloroplastic from Arabidopsis with 39.27% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g29760, chloroplastic from Arabidopsis with 39.16% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G29760)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416171.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;