Ll_transcript_315843

• Id Trinity: TRINITY_DN46747_c1_g6_i1
• Name Transcript: Ll_transcript_315843
• Sequence: CAAAGTTGACATGTATACAGTGGCATCCATCTTGTGAAAGAGATAGCGAGGAAAGGAAAGTATGTCGAAAAGCGTAACAAACTTGAGCACCGTTACAGCT TATCATCATAGCCACGGAAACAACTCAATCTATCTCAATTCTCCCAACTCTTTCATCTTCTTCGGACAATCTTCAACTAACTCCAACCTTTCCTGTCGTA CCACCAATGTCGCTGTCTCTGTCTCTTTGTCCCACACCACTCACAACACAACCATATATGATAATGAAAATGCAACAATTTGCAAGTTCTGCGAAATGGG TCATCTTAGAAAATCCATGGAGTTGCTTATAAAGTCACAAAAATCAAAACTTGAGTTGAATACTTACTGTTCTGTGTTGCAGCTATGTGCTGAGCTTAAA TCTCTGGAAGATGGGAGAAGGGTTCATTCCATTGCCATTTCCAATGGTATGAAGATTGAAGGGGCTTTGGGGGCAAAACTGGTTTTCATGTATGTAAATT GTGGTGATTTAATTGAAGGGAGAAGGATATTTGATAAGATTCTCAATGATAAGGTTTTTCTATGGAATCTTATTATGACTGAATATGCAAGGATTGGTAA TTATAAGGAATGTTTGTGTATTTTTAAGAAAATGCAGGAGTTGGGAGTTGCAGGGAATGCTTTTACATTTACTTGTGTGTTAAAGTGTTTTGCTGCATTG GGGGAGGAAATGGAGTGTAAAAGGGTTCATGGGTATGTTTATAAACTTGGTTTTGGTTCTTATAACGCTGTTGTTAACTCTCTCCTAGCGGCTTATTTCA AATATGGTGGTGTTGAGAGTGCATATAAGTTGTTTGATGAATTGAGTGATCAAGATGTTATCTCATGGAATTCTATGATAAGTGGTTGTGTGATGAATGG TTTTTCCAGAAAAGGGCTTGAGCTTTTCATTCAGATGTTGATTTTGGGTGCTGATATGGACTCGGATACCTTGGTTAGTGTTCTTGTGGCTTGTGCGAAT GTTGGGAATCTTTCATTTGGTAGAGCTCTTCATGCTCTTGGAGTGAAAAGATGTTACAGTGGGAATGCCGTGTTCAACAACACCTTACTGGACATGTATT CAAAATGCGATAATTTAAATGCCGCAGCTGATGTATTTGTAAAGATGGGTGATAAAACGATTGTTTCATGGACTTCAATTATAGCTGCGTATGTACGGGA AGGTCGATATGATGATGCTATTGGGTTATTTGATGAAATGCAAAGCAAAGGTCTTAAGCCAGGTGTTTATACTGTCACAAGCATCGTTCATGCTTGTGCT TGTAGCAACTCCTTGGATAAAGGCAGGGAAGTACATGATTACATTACAAAGAACAAGATGGGGTCAAGCTTGCCTGTCTGTAATGCTCTCATGAATATGT ATGCAAAATGTGGAAGCATGGAAGAAGCTCATATAATTTTCTCTAAAATTCCAGTTAAGGATATTGTCTCATGGAATACCATGATTGGAGGCTATTCAAA AAACTCACTTCCGAACGAAGCTCTATATCTTTTTGTTGACATGCAAAAACAATCAAAGCCTGATGAGATTACAATGGCTTGTGTCCTTCCAGCTTGTTCT GGTTTATCAGCTCTAGACAAAGGCAGAGAGATACATGGGCACATATTAAGAAAGGGGTACTTTTCAAATCCGAATGTATTGGGTGCACTGGTCGATATGT ATGTGAAGTGTGGATTACTAGTTATTGCAAAGCTACTCTTCGATATGATTCCTAAAAAGAATCTGGTCCATTGGACTATTATGATAGCTGGATATGCCAT GCATGGTTTTGGAAATGAAGCGATTTCCACTTTTGAAAAGATGAGGAAAGCTGGTATTGAGCCTGATGAGACTTCCTTCACTTCTGTACTTTGTGCTTGC CGTGATTCTGGATTACAGAAAGAGGGGTGGGTATTCTTTAATTACATGAGAAGGAAATGCAGCATTGAGCCCAAATTAGAACACTATGTCTGCATGGTGG ATCTCCTTGCCTTATCTGGTAATCTATCCAAGGCATACAAGTTCATTGAGACCATGCCAATTAAACCAGATGCTACTATTTGGGGTGCCTTGCTTTCTGG ATGCAGGATCCATCACGATGTTGTGCTAGCAGAAAAAGTGGCGGAGCATATTTTTGAGCAAGAGCCAGAGAACACAAGATATTATGTTCTTCTAGCGAGC GTCTATGCAGATGCAGAAATGTGGGAAAATGTGAAGAAGTTTCAAGAAAAGATTCGTAAACGGGGATTTGAAAAGAACGCAGGCTGTAGTTGGTTAGAGG TCCAAGGAAAATTTAATATCTTTGTTGCTGGGGACAAGTCACACCCTCAAGCCAGAATGATAGATTCATTGCTGAAAAAACTGCAAATGAAAATGAAGAA TGAAGGTTACTCTCCTAAGATGAGGTATGCATTGTTTAATG
• Tissue: pods
• Gene name: LI_gene_146887;
• Additional information: details;

Expression of Ll_transcript_315843

FPKM

• PAB: 0.9
• PNAB: 1.2
• PS1: 0.6
• PS2: 0.6
• PS3: 0.6
• PW1: 0.6
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315843

• Blastp: Pentatricopeptide repeat-containing protein DOT4, chloroplastic from Arabidopsis with 53.72% of identity
• Blastx: Pentatricopeptide repeat-containing protein DOT4, chloroplastic from Arabidopsis with 53.72% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G18750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464352.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;