Ll_transcript_316619

• Id Trinity: TRINITY_DN46749_c1_g2_i1
• Name Transcript: Ll_transcript_316619
• Sequence: AATCACTTACCTTTATAGTATTTTACATTGTCTCTCCAGAACCGTTATCCATAACAAGGAACACTACGTGGCCTTCGTCTGAACTCTATTCGAAACCTTA CTATCTTACCTTCTCCCCCTTCTCCCCCTTCTCCCACTCCTTAACCCTATCTCCTTAAACCTTTCCACTCTTAAACCCAACAACATAACACAACGAACCA CACCTACTTTATTCAACCACATCAATGTTATTTCATTACCCTCTTCTCAATTTCTGAATGCAACCTTGTTATATAAAATGACCCTTTCACCCTCTCTTTC TCTACCCAACCCTTCCCTCTTCTCCACCACTTTCCTAAACCCTAACAATAACAACAACAACAACAACATCGTCAACCTCAACAACGTTAACCTCAACAAA CACTTACTCCGCCACAGGTTCCACTTCCAGGCACGCGCCAAGTCGCGTGAAATAGTCCTCGGAAACCCTTCTGTAACATTAGAGAAAGGAAAATATAGTT ACGATGTGGAAACCCTAATTAACAAGCTTAGTAGTCTTCCACCGAGGGGAAGCATTGCTCGGTGTCTCGATTCCTTCAAGAACAAGCTTTCTCTCAATGA TTTCGCCTTAGTGTTCAAGGAATTCGCGCAGCGCGGCGATTGGCAGAGGTCTCTGCGTCTTTTTAAGTATATGCAGCGCCAGATATGGTGCAAGCCGAAT GAACATATATATACTATTATGATTACCCTTTTGGGTAGAGAAGGGTTGCTCGATAAGTGCCGAGAGGTGTTTGATGAAATGCCTAGCCAAGGCGTGCCGC GCAGCGTGTTTGCGTACACTGCGGTTATTAATGCTTATGGGAGGAATGGTCAGTATGAGACTTCAGTTGAGTTGCTTGATAGGATGAAGCAGGAGAGGGT TTCGCCGAGTATATTGACTTATAATACTGTGATTAATGCTTGTGCTAGGGGTGGCTTGGATTGGGAGGGTTTATTGGGGTTGTTTGCTGAAATGAGGCAT GAAGGGGTACAACCAGATGTTATTACTTATAATACATTGCTTAGTGCTTGTGCTCAAAGGGGATTAGGTGAAGAAGCTGAAATGGTGTTCAGAACCATGA ATGAAGGTGGGATTTTACCTGATACAATGACTTATCGTTATCTTGTGGACACATTTGGTAAGTTGGATAAACTTGACAAGGTTTCAGAGCTTCTTAGGGA AATGGAGTCCGGGGGTAATTTGCCAGATATTACCTCTTATAATGTGTTGTTAGAGGCTTATGCGGGATTGGGTGCCATGAAAGAGGCAATGGATGTATTT CGGCAGATGCAGGCGGCAGGGTGTGTGCCAAATGCAGCGACGTATAGTATTTTGTTGAGTTTGTATGGAAAACGTGGGAGATATGATGATGTTCGTGATC TTTTTCTTGAAATGAAAGTGAGCAACACAGACCCTGATTCTGGTACTTATAACATTCTCATAAAGGTCTTTGGGGAGGGTGGATATTTTAAGGAGGTAGT CACTTTGTTTCATGATATGGTGGAGGAGAATATCGAGCCAAACATGGATACTTACGAGGGTTTGATATTTGCTTGCGGTAAAGGAGGGCTCTATGAAGAT GCCAAGAAAATTTTACTTCATATGAATGAAAAGGGAATAGTGCCAAGTTCCAAGGCTTACACTGGGGTAATTGAAGCATATGGGCAGGCTGCACTGTATG AAGAGGCTCTCGTTGCATTTAACACTATGAATGAAGTGGGAAGCACCCCAACTGTTGCGACCTGCAATTCACTCATTCATGCATTTGCAAGAGGGGGATT GTACAAAGAAGCAGAAGCAATTTGGTTGAGGATGGGGGAGTCTGGTTCATCAAGGAATGTGCATTCGTTCAATGGCGTGATTGAAGCTTTTAGGCAAGGA GGCCAGTATGAAGAGGCTGTAAAAGCTTATGTTGGGATGGAAAAGGAAAACTATGATCCTAATGAGCAGACACTTGAAGCAGTGTTAAGTGTGTACTGTT CTGCAGGTCTTGTCGATGAGAGTGAGGAGCATTTCCAAGAAATTAAAGCATCAGGAAATCTGCCAAGTGTCATGTGCTATTGCATGATGCTGGCTCTTTA TGCTAAGAATGACAGGTCAAATGAGGCCTATAATCTTATTGATGAGATGGTCACAACGAGGGTGTCAGATATTCATCAAGTGATTGGAAAAATGATCAAG GGAGATTATGATGATGAGTCTAATTGGCAGATTGTAGAGTATGTCTTTGACAAACTCAATTCGGAAGGATGTGGATTGGGAATGAGGTTCTATAACACAC TATTAGAAGCTCTTTGGTGGATGTGCCAGAGAGAAAGAGCTGCAAGAGTGCTAAATGAAGCATCAAAGCGAGGGCTTTTCCCTGAACTTTTCCGTAAAAA TAAACTTGTGTGGTCTGTGGATGTACACAGGATGTGGGAGGGTGGTGCATTAACAGCACTGTCAATTTGGCTGAATGATATGCAGGAGATGTTCCTGACT GGAGATAATCTTCCCGAGCTTGCAACAGTTGTTGTGGTCCGGGGTCGATTGGAGAAAAGCACACTCGCCCAAGATTTCCCTATTGCGAAGGCTGCCTTTT CATTCCTGCAGGATAATGTTCCATCTTCATTCACTTTCCCTGGATGGAACAAAGGCCGCATCGTATGCCAGCAGTCACAACTGAAGCGAGTTCTCTCAGG CACTGAATCATCTTCAAACAGAACAAAAAAGGATAAATTAATTTCTTTAAGTAATACTCAACTGACCAGTGCAGGAGCTATAGGATCCAAACCTGATGCT CTAAGTGGTAAGGCTAAAGATGTTGATTCTAGAACTGGCAGTACTAGAACAGAGCTTTTAACAAGTGCAGTTTAGATTAGAGAAATATAGACATTGCATT CATTACTTTCCCGCGCCATGTTTAGGTTGATTGAAATTTAAGTGTAGGGCACATATCACATATTTGTTACACTAATGTTCTTAAGTAGGCTGGCTTTCTG GTCACCAAAATTTTGCTAAATATATTCTCGAGGAATCCAAAGGAAAGCTCAGTTTGCTAGAAACATGGTTACTTACTGTCAGTGCATACATTTTTTTATC TTTTATTAAAAGTTTATATGCTAATATTAGTCGACCTCACCTTGTTATTTATATGCTGTTATTAATAACATACTGATCCTGACAATTTTTTGTTTCATAT ATACACACCAGACTACGTATTTAATTCTCTTGCCCTTTAGGGTGAGTTTCAAATGAAGTAGGCTCCACACTTGTATATTATGC
• Tissue: pods
• Gene name: LI_gene_146909;
• Additional information: details;

Expression of Ll_transcript_316619

FPKM

• PAB: 8.2
• PNAB: 12.2
• PS1: 6.9
• PS2: 3
• PS3: 4.9
• PW1: 10.4
• PW2: 6.8
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_316619

• Blastp: Pentatricopeptide repeat-containing protein At1g74850, chloroplastic from Arabidopsis with 70.85% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g74850, chloroplastic from Arabidopsis with 73.53% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G74850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456519.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;