| Id Trinity | TRINITY_DN46751_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_314611 |
| Sequence | TTCAACAATTGGCGACAAATCTTTTATTGCGCTTTCTCTTTCCTCATCCATGTTTGTGTCTTTTTTGTAAACTTCATTTTTTCTTTCTTCATTTCCATTG TTCATAAACCCAACCCCAACCCTCCACAATCTCCTATTCATTGTTATAATTGTGGCTATTACAACATAGCCCTTCATTTCTCTGTTGAAAACGACATAAT CTACACATTTATAGAAATCGAATCAAGAGAGAATTAACTAATTTATGTAAATGAGAGAAAAGAATAGGGAGGAGGAAGAGGAGGGGGAAGGGAAGCAAAA AACGACGCCGTCAGCGAAATCTGACGGCCCTTCTTCTTCTTCAACGCCGTCGTCTTCATCATCTTCTTCTTCGGATGAGAAAGAATACGAGGTTGAAGAA CTTAGGGATCGGATAAAATCGTCAAGAGGGAGCAGGTTCAATTTGATAGAGAAGGAGTTTAGTTGGCGAAGGAAGTTCAGTGGTGAATCCCTTCTTGCTG GTTTCAAAGACTTCGTTATCCTTCCTCATAACTGGTGGTATCGGGTATGGTCACAATTCATCTTGTTATGGGCAGTGTACTCATCATTCTTCACTCCAAT GGAGTTTGGATTTTTCCGTGGATTGCCTGAGAATCTCTTTGTACTGGATTTCATTGGACAAATATTCTTTCTTGTAGACATTGTTTTACAGTTCTTTGTT GCTTACAGAGACAGTCAGACATATCGTATGGTCTACAAGCGAACCTCTATTGCTCTGCGGTATCTAAGATCTAGCTTTGTCTTTGATTTTCTTGGATGTA TGCCTTGGGATATCATCTACAAGGCTTGTGGACGAAAAGAGGAAGTGAGATACCTTCTGTGGATCAGACTATATCGGGCACGGAAAGTACATGAATTTTT ATACAATTTGGAGAAGGATATACGTATCAATTACATTATTACTCGGATTGTGAAACTTCTAGTAGTTGAGCTCTACTGCACACATACAGCAGCCTGCATT TTCTACTATTTGGCTACTACACTACCTGAATCCCAAGAAGGGTACACATGGATAGGAAGTTTAAAAATGGGTGACTTTAGTTATTCAAATTTCAGACAAA TTGATCTTTGGAAGCGCTACACAACATCTTTGTATTTTGCTATTGTTACTATGAGTACTGTCGGCTATGGAGATATACATGCAGTAAATATGAGAGAGAT GATATTCATAATGATATATGTATCATTTGACATGGTTATTGGTGCTTATTTGATCGGTAACATGACAGCTTTGATAGTCAAGGGATCAAAGACTGAAAAG TTCAGGGACAAGATGACAGATCTTATGAAATATATGAACAGAAATAGACTTGGAAGGGATATCCGTGAACAAATAAAAGGCCATTTCCGCTTACAGTATG AGAGTAGCTACACTAACGCTGCTGTAATTCAGGAAATCCCCATTTCTATTCGATCTAAGATATCTCAAACATTATATTTGCCATACATCGAAAAAGTTCC ACTTTTTAGGGGCTGCTCTTCAGAATTCATCTGCCAGATTGTTACTAGGCTCCATGAGGAATTCTTTCTTCCGGGGGAAGTTGTCATGGAACAAGGAAAT GTTGTTGATCAACTATATTTTGTCTGTCATGGTGTTCTGGAGGAAGTAGGCACAGCTGAGGACGGATCTGAAGAAACTGTTTCATTTCTTCGACCCAACA GCTCATTCGGAGAAATATCTATTCTTTGCAACATCCCTCAGCCATATACTGTTCGCGTTTGTGAACTGTGCAGGCTTGTGCGGCTTGATAAACAATCATT TACAGATGTCCTAGATATATACTTTTATGATGGAAGGAAAGTACTAAACAACCTTCTAGAGGGTAAAGAGACTTTCCGAGGTAAGCAGTTGGAGTCAGAC ATCACATTTCATATCGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTAAACAGTTCAGCTTTTCATGGGGATCTGTACCAGCTAAAAGGTTTGATTCGAG CTGGAGCTGACCCCAACAAGACAGATTATGATGGAAGGTCACCTTTGCATCTTGCGGCATCTAGAGGACATGAGGATATCACACTTTTCCTTATACAAGA AGGTGTAGACCTCAATGTTAGAGATAACTTTGGAAACACACCGTTAGTTGAAGCAGTTAAGAACGGACATGATCGAGTTGCTTCTTTACTTGTTAGAGAA GGGGCCTCTATGGAGATAGAAAATGCTGGTAGCTTTTTATGTACAGCAGTTTTAAGGGGAGATTCAGATTATCTTAAAAGGCTTTTATCTAATGGCATGG ATCCTAACTTGAAAGATTATGATTATCGAAGCCCTCTTCACATTGCTGCAGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTAGAAGCCGGAGCTAG TGTTTTTGCCAAAGACAGATGGGGAAATACCCCGCTTGATGAAGCCCGGATGAGCGGAAATAAGAATCTGATCAAGCTACTTGAAGATGCAAAATCTGCT CAGTTGACAGAATTCCCATGTCGTTCCGAAGAATTTACAGATAAAATGCACCCAAAGAAGTGCACAGTGTTGCCTTTCCACCCATGGGATCCAAAAGAAC ATAGAAGACATGGAATTGTATTATGGATTCCACACACCATCGAAGAACTAATCAAAACAGCAGCCGAGAAGATCGAGTTAACCAGTGATTCTTGTATTTT ATCAGAAGATGCTGGTAAAATTACTGATGTGGACATGATTAAAGATGGTCAGAAGCTGTATTTGGTTCCTGAAAAATGTTAGACATTTGTATGTACTGTG CCTATTGTAATGTTTTGCAGTCTCTATAAATAAGCTCATTACTTGATCTTAATTACCATGTAACAAGTTCCTGTCCTGTAAAAATATAGACCAGTAATTA AGATCAAATGATGTGCATGCTTTTTAGTCGTGATATACCGAAGATTATGGTTTAGGATTTCATTAATATGCTATTGAGTCTTCCACTAACCTGGCCACCA CTATAGTCTGTCCCATACCGCGATTGAGATACTTCGCCGAAGAATATTGCAGAAAATTATTGTGCTCATTCCCAAACAAAGTTCGGGCTATGCAGAAGCT GTTGCAGCCAATGAAAGACAAAGGTAGCAAAACCAGGCTTGGTATTATCATCTTCAATGTTTCCAGCTTTGTAAAGATGGCATTCTTGCTAAAGTTGGCC AACTCAGATCACATATGTTACCAATGTTAGCTTCTGCTAGTTCCGTCGCAATAATGGCGCGCATGCTCATATTTCTGATGCAATTTTTGTCATTTGCCTC ACTCAAATCCTTTACTTGCTCTACCTCAAGTTAATTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_146917; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314611
| Blastp | Potassium channel SKOR from Arabidopsis with 71.96% of identity |
|---|---|
| Blastx | Potassium channel SKOR from Arabidopsis with 72.28% of identity |
| Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
| Kegg | Link to kegg annotations (AT3G02850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461635.1) |
| Pfam | Ion transport protein (PF00520.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |