Id Trinity | TRINITY_DN46751_c0_g1_i3 |
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Name Transcript | Ll_transcript_314613 |
Sequence | TTCAACAATTGGCGACAAATCTTTTATTGCGCTTTCTCTTTCCTCATCCATGTTTGTGTCTTTTTTGTAAACTTCATTTTTTCTTTCTTCATTTCCATTG TTCATAAACCCAACCCCAACCCTCCACAATCTCCTATTCATTGTTATAATTGTGGCTATTACAACATAGCCCTTCATTTCTCTGTTGAAAACGACATAAT CTACACATTTATAGAAATCGAATCAAGAGAGAATTAACTAATTTATGTAAATGAGAGAAAAGAATAGGGAGGAGGAAGAGGAGGGGGAAGGGAAGCAAAA AACGACGCCGTCAGCGAAATCTGACGGCCCTTCTTCTTCTTCAACGCCGTCGTCTTCATCATCTTCTTCTTCGGATGAGAAAGAATACGAGGTTGAAGAA CTTAGGGATCGGATAAAATCGTCAAGAGGGAGCAGGTTCAATTTGATAGAGAAGGAGTTTAGTTGGCGAAGGAAGTTCAGTGGTGAATCCCTTCTTGCTG GTTTCAAAGACTTCGTTATCCTTCCTCATAACTGGTGGTATCGGGTATGGTCACAATTCATCTTGTTATGGGCAGTGTACTCATCATTCTTCACTCCAAT GGAGTTTGGATTTTTCCGTGGATTGCCTGAGAATCTCTTTGTACTGGATTTCATTGGACAAATATTCTTTCTTGTAGACATTGTTTTACAGTTCTTTGTT GCTTACAGAGACAGTCAGACATATCGTATGGTCTACAAGCGAACCTCTATTGCTCTGCGGTATCTAAGATCTAGCTTTGTCTTTGATTTTCTTGGATGTA TGCCTTGGGATATCATCTACAAGGCTTGTGGACGAAAAGAGGAAGTGAGATACCTTCTGTGGATCAGACTATATCGGGCACGGAAAGTACATGAATTTTT ATACAATTTGGAGAAGGATATACGTATCAATTACATTATTACTCGGATTGTGAAACTTCTAGTAGTTGAGCTCTACTGCACACATACAGCAGCCTGCATT TTCTACTATTTGGCTACTACACTACCTGAATCCCAAGAAGGGTACACATGGATAGGAAGTTTAAAAATGGGTGACTTTAGTTATTCAAATTTCAGACAAA TTGATCTTTGGAAGCGCTACACAACATCTTTGTATTTTGCTATTGTTACTATGAGTACTGTCGGCTATGGAGATATACATGCAGTAAATATGAGAGAGAT GATATTCATAATGATATATGTATCATTTGACATGGTTATTGGTGCTTATTTGATCGGTAACATGACAGCTTTGATAGTCAAGGGATCAAAGACTGAAAAG TTCAGGGACAAGATGACAGATCTTATGAAATATATGAACAGAAATAGACTTGGAAGGGATATCCGTGAACAAATAAAAGGCCATTTCCGCTTACAGTATG AGAGTAGCTACACTAACGCTGCTGTAATTCAGGAAATCCCCATTTCTATTCGATCTAAGATATCTCAAACATTATATTTGCCATACATCGAAAAAGTTCC ACTTTTTAGGGGCTGCTCTTCAGAATTCATCTGCCAGATTGTTACTAGGCTCCATGAGGAATTCTTTCTTCCGGGGGAAGTTGTCATGGAACAAGGAAAT GTTGTTGATCAACTATATTTTGTCTGTCATGGTGTTCTGGAGGAAGTAGGCACAGCTGAGGACGGATCTGAAGAAACTGTTTCATTTCTTCGACCCAACA GCTCATTCGGAGAAATATCTATTCTTTGCAACATCCCTCAGCCATATACTGTTCGCGTTTGTGAACTGTGCAGGCTTGTGCGGCTTGATAAACAATCATT TACAGATGTCCTAGATATATACTTTTATGATGGAAGGAAAGTACTAAACAACCTTCTAGAGGGTAAAGAGACTTTCCGAGGTAAGCAGTTGGAGTCAGAC ATCACATTTCATATCGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTAAACAGTTCAGCTTTTCATGGGGATCTGTACCAGCTAAAAGGTTTGATTCGAG CTGGAGCTGACCCCAACAAGACAGATTATGATGGAAGGTCACCTTTGCATCTTGCGGCATCTAGAGGACATGAGGATATCACACTTTTCCTTATACAAGA AGGTGTAGACCTCAATGTTAGAGATAACTTTGGAAACACACCGTTAGTTGAAGCAGTTAAGAACGGACATGATCGAGTTGCTTCTTTACTTGTTAGAGAA GGGGCCTCTATGGAGATAGAAAATGCTGGTAGCTTTTTATGTACAGCAGTTTTAAGGGGAGATTCAGATTATCTTAAAAGGCTTTTATCTAATGGCATGG ATCCTAACTTGAAAGATTATGATTATCGAAGCCCTCTTCACATTGCTGCAGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTAGAAGCTGGAGCTAG TGTTTTTACCAAAGACAGATGGGGAAATACCCCGCTTGATGAAGCCCGGATTTGTGGAAATAAGAACCTGATCAAGCTACTGGAAGATGCAAAATCTGCT CAGTTGTCAGAATTCCCATGTCGTTCCCAAGAATTTACAGATAAAATGCACCCAAAGAAGTGCACAGTGTTCCCGTTCCACCCTTGGGATCCAAAAGAAC ATAGAAAACATGGAATTGTACTATGGATTCCACACACCATTGAAGAGCTAATCAAAACAGCAGCAGAACATATAGACTTTCCTAGCGATTCTTTTATTTT ATCAGAAGATGCTGGTAAAATTACTGATGTGGACATGATTAAGGATGGTCAGAAGCTGTATTTGGTCCATGAAACATCTTAGACATTCACATCATGTCCC TTGTATAATAACCATAATGTAACGTTTGTAATGTTTTGTTGTCTCTTAAAATTAGCTTTATCATTTGATCTCAATTACCATTCAAGTGTAACAAGTGTCC TATCCTGTAAAAAATACAGAAGGATCAAATGATGTGCATATTGTGCCAAAGCATACTGCACAGAATTATTGTGGCCACTCCCAACATATGTCATAGAGTC ACCAAACAAAGCTCATAGGCTCTGCAGAAGCCCCTGCTGCCTTTGAAGTTTTACAGATATAGCTTTAACAGAAGAAGTTGATGCTAGGCAACT BLAST |
Tissue | pods |
Gene name | LI_gene_146917; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314613
Blastp | Potassium channel SKOR from Arabidopsis with 71.99% of identity |
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Blastx | Potassium channel SKOR from Arabidopsis with 72.31% of identity |
Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
Kegg | Link to kegg annotations (AT3G02850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461635.1) |
Pfam | Ion transport protein (PF00520.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |