Ll_transcript_316479

• Id Trinity: TRINITY_DN46756_c3_g4_i1
• Name Transcript: Ll_transcript_316479
• Sequence: AAAAGAATAAATACAAACTACCATATGTGGAGTTCTCTGTTCACAAACCTAAATAAACATACAGAGGATACAAACACCAGGTACGATGTTGTTCCATTCC ACCACACCTCTTCTGAATCCTCAACCTTACACACTCTTCTCTCCATTCCCTTTCTTCCTTTCCACTCCAATTCCCCGAAACCTTCTTTCTTTACAAACTC TCTATTTCCCCACTCACTGCAACCACGTTCTCGGTGACTCTCTCGTTTTTGAAGATGCCATTTTTGAACACCCTATTCTCCCAAACAACATTAATTCCTA CAATCTCATCAAACCCAGAAAGAAAAAGAAAAAGCAAAAGAGAAATGTGGCACCCCCACAAATTGTGCCTGACAATTTGGTCCCTGAGAAGTGGAGGAAA ATTCAAGATGAGATTAACATAGCGAAGAATGAGAGTAAGAAGATTGCAGAGGAGGTGGAGTTAAATAGCAAGGTTGAAAAGAAGAGAAGAGCTTTGATTC TATTGAAGGATTTGAATATGGATCGGTATAAGGCTTATAAGGAAGCTAAATTGGCACAGCTGAAACCACTTGTTCTTGATAACCCGTCGAGGTTTCCGGT GAAAGAAGAAGACTTTGTTGAAAAAGAAGAAGATGGTTATGATGATGATGATGATGAGTTTGGTGGTAGTGAGCGTGTTAAGCCAAAGAATCCTAGATTG GCTGTTTATGGAAAGAGTTTGGAGGATGTTTCTGAGTTTTTGAATAGCGAGTATTATGAACCTCATGCTAATAAGAGCTCTCAAGGTCATCAAAAGTTGT TTACTAAGGAGGAGAAGGTTTTGTTGAAAAAGGGAATACCGGACTTGGCAAGTGCTACTTCAGATAAATGGCTTCCTCTGCACACTTTAGCAGCATGTGG AGAATTTTATCTTGTAGATTCTTTGATGAAACATAACGTTGATATTAATGCTGTGGATAAGGATGGTTTGACTGCACTTCACAAAGCAATAATTGCCAAA AATCAGGCCATAACCAACTATCTGCTCATAAATTCAGCTAATCCATTTGTAAAAGATAAAGTGGGTGAAAATTACTTTTCGTTACGTTTTACTATTATAT TTGCGTATGTGTGCCTTTACTTGCTGGTTTTCTTCAGTAAGGTTAATTTTGATACTCTTCCTATCATATCATGAATGATCGTGATAACAACGATAATTTT CCAAGGGGCAGCACTGATCATGTATTAAAGCAGGACTGTATCGTTATAAAACAACATATTGTTTGTTATCATATTCGTATTTACCTGTATCTGATGATAT TTTGTTGTTTATGTGTCGGAAACAGGATAGGGCCACCTTGATGCACTATGCAGTACAAACAGCTTCTAGCCAGACAATTAAAATACTTTTACTGTATAAC GTGGATATAAATCGTCCCGACAAAGATGGCTGGACACCGTTACATCTTGCTGTTCAAACTCAGAGAACAGATTTAGTGAGGCTTCTGCTCATTAAAGGTG CCGATAAGACATTAAGAAACAAGGATGGTTTAACTCCACTTGATCTTTGCCTATACCTTGGTCAAGGTCTTAGAACATATGAGCTAATCAAATTGTTGAG AGAGAAGAGACAATACAAATTTTGAATGTATTGAACAAACAAATCAAGAATAGGGAAGTTTCAGAACATCAATGGTTATGTAATATGTTCAAATTTATAT TTAAAATGATATGTAAATATTCATGAAAAAGAAAGAAAAATCAAATCACTCCCCAAGTATATAAAAGTAGAGTAACTTTTTATATAATTCTATATTATAT TATTGGTGGGGATCAATTTACTTCAAAAGTAAGTCTTCTTAGAGTTACTCTTCATCTTAGTCATCAATTTATTGAGAATCCAATGATTTGAATTTACCAC TAGTTCAAACCAGTGGATTTCTCTAGAATTGATCTCCCC
• Tissue: pods
• Gene name: LI_gene_146943;
• Additional information: details;

Expression of Ll_transcript_316479

FPKM

• PAB: 0.8
• PNAB: 1.5
• PS1: 0.7
• PS2: 0.8
• PS3: 0.8
• PW1: 0.2
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_316479

• Blastp: Ankyrin repeat domain-containing protein, chloroplastic from Arabidopsis with 46.18% of identity
• Blastx: Ankyrin repeat domain-containing protein, chloroplastic from Arabidopsis with 44.81% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT5G66055)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422582.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;