Ll_transcript_315183

• Id Trinity: TRINITY_DN46757_c6_g7_i3
• Name Transcript: Ll_transcript_315183
• Sequence: AAGTGCTTTAATTGATGTATGGGAGGAATCATGAGGTGGGGGATGGAAGGAAGTTGTTTGATGAATTGCCTGAACCAGATGCTGTGTGTTGGACATCAGT TATTTCAGCGTTTGCGAGGAATGATATGTTTAAGGAAGCTTTGGATTTTTTTTATGTTATGCATATGGATCATGGGTTGGAGCCAGATGGGTTTACTTTT GGGACATTGTTGGCTGCTTGTGCGAATTTGGGGTGGTTGAGGCAGGGGAAAGAGGTGCATGCCAAAGTTGTTACTTCTGGGATATGTGGGAATGTGGTTG TCGATAGTAGTCTCTTAGATATGTATGGAAAATGTGGCTTGGTTCAATGGTCTAGGAGTATTTTTGATAGGATGAGCTTTAAGAATTCAGTGTCTTGGAG TGCTATGCTTGGTGTGTATTGCCAAAATGGAGAATGTGAAACTGTGCTGAATCTTGTTAGGGAGAGGAGAGTTGCAGATCTTTACAGCTTTGGGACTATT ATTCGTGCATGTTCAGGGCTGGCTGCTGTTAGACAAGGGAAAGAGGTTCATTGTCAGTATGTAAGAAAGGGTGGTTGGGGAGATGTTATAGTAGAGTCTG CCATGGTTGATCTATACGCGAAATGTGGGTGCGTTGATTTTGCACACAGATTGTTCTTGAATATGCAAGTTAAAAATTTGATAACGTGGAACTCAATGAT TGGTGGGTTTGCACAGAATGGAAGAGGGGAAGAAGCACTGGCCTTATTTGAGGATATGATCAAAGAGGGGGTGAAGCCTGACTATATTACTTTTATTAAT GTTCTTTTTGCTTGTAGTCATACGGGTTTGATTGATCAAGGGAGAAAATATTTCGCTTCAATGACAGACGAATATGAGATTAAGCCTGGAGTTGAGCATT ACAATTGTATGATTGATCTCCTGGGCCGTGCTGAGCTAATAGAGGAGGCTGAAAGTTTACTAGAGAATGCAGACTGCAGACATGATCAATCGCTTTGGGC GGTTCTTCTTGGGGCTTGCACTAAATGCTCAGACTATTTAACTGCGGAACGTGTTGCAAGAAAGATGATTGAGCTGGATCCTAATTTTCATTTAAGCTAT GTTCTGCTTGGCAACATTTATAGAGCAGTTGGCCGATGGAATGATGCTCTGGAGATCAGGAAGTTAATGGAAGATAGAGGGGTTAAGAAGATTCCAGGGA AGAGCTGGGTTGATAATGAGAATCAGAAAGGTTCTCGTCTTGATTTAACCAAGATGATTGTTGCTGCGTAAAGCAGTGTTCTAGCATGGCATTGGTTGTG TGATGAGTAGAAATTGGCAGCTGGATTTTTTAACTGCATCTGATACTACATCAAATGCACCCTCATTTCAAACTGCTTAATCTCTTAGCTGTCATGGAAG GTTATGAGCTAGGATTTACCCTTATGGAAGGGTTATGCTACCAGATTAACTTTTGCAAGCATTAGCTTTATGTAGAATATCAGAAGATTCTATGGTGCTG CTCTGCATTTCAAGAATGCTTTGTCGCCTGACTTTGAGATGGTACATTATGGCATCCTTTGGTCCATGTAGTCAACCCTACCTAGTGGGCAAAGGTTTAT CTATTCATTTCTCAGCATAGGATTGTTGGGTGCCTAGTTGCAGAACCAATTGGAGTGCCTTGGTCAATTGCTGGACATTATATAGGGCGAGGAAAAAAGA AATAAAGTCATATGCAACCACTCTCCAGATCAGGAATATTATTTTTCGAAGAGAAGTTGAAAAAATAGTCATTTCAATGTGATTCTGAGGGAATGGTTGG ATAACATGGCAGGGCAATCTTCTGTGAAAACAATGCAGTAGCTGCTGGTTGTGTTATTAGAGCCATTGGGTTACTCCTTCCAACAAAAGAAAAGGAATCT CTTGCCAATTGCTAGGTGCAGTGAGGTAAAATAAACTTGGCTCTAGTTTTTTAGTGTTTTCTCATGACAATGTTAAAAGGAAAATTTTTCTATCAAATAT TACACACCTCACCTACACAAAGGTAGTTTAGTTAATTACTTGGTTAGTTGGTTAGCACTTAATGTTTAGCAGACTAATATATTTTTCTTTGAAAATATTA TGTTAGTCCATAAGTCAATAGTCTAACTCACCAGTACCAAGTCCAGCTTAAATGTAGAAATAACTGAGTTGAACTAAAATCATGTAACCCAACCTTCGAC AATGGTCGGCGTGTCATGAGACTTACAAGAGTATATA
• Tissue: pods
• Gene name: LI_gene_146957;
• Additional information: details;

Expression of Ll_transcript_315183

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315183

• Blastp: Pentatricopeptide repeat-containing protein At1g03540 from Arabidopsis with 60.85% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g03540 from Arabidopsis with 60.85% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G03540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415827.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;